Tropical specialist vs. climate generalist: Diversification and demographic history of sister species of Carlia skinks from northwestern Australia

A late Quaternary record of monsoon variability in the northwest Kimberley, Australia

(2017) Emily Field et al.   QUATERNARY INTERNATIONAL

A plethora of planigales: genetic variability and cryptic species in a genus of dasyurid marsupials from northern Australia

(2016) Michael Westerman et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

Phylogeography, hotspots and conservation priorities: an example from the Top End of Australia

(2016) D.F. Rosauer et al.   BIOLOGICAL CONSERVATION

Intraspecific variation in climate-relevant traits in a tropical rainforest lizard

(2016) John Llewelyn et al.   DIVERSITY AND DISTRIBUTIONS

Gecko phylogeography in the Western Indian Ocean region: the oldest clade of Ebenavia inunguis lives on the youngest island

(2016) Oliver Hawlitschek et al.   JOURNAL OF BIOGEOGRAPHY

Genetic structure of island and mainland populations of a Neotropical bumble bee species

(2016) Flávio O. Francisco et al.   JOURNAL OF INSECT CONSERVATION

Multilocus phylogeography reveals nested endemism in a gecko across the monsoonal tropics of Australia

(2016) C. Moritz et al.   MOLECULAR ECOLOGY

Phylogenomics at the tips: inferring lineages and their demographic history in a tropical lizard, Carlia amax

(2016) Sally Potter et al.   MOLECULAR ECOLOGY

Inferring responses to climate dynamics from historical demography in neotropical forest lizards

(2016) Ivan Prates et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Spatial Framework for Understanding Population Structure and Admixture

(2016) Gideon S. Bradburd et al.   PLoS Genetics

Extensive Acclimation in Ectotherms Conceals Interspecific Variation in Thermal Tolerance Limits

(2016) Anna F. V. Pintor et al.   PLoS One

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

(2015) Siavash Mirarab et al.   BIOINFORMATICS

Comparative phylogeography of five bumblebees: impact of range fragmentation, range size and diet specialization

(2015) Simon Dellicour et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Importance of dispersal routes that minimize open-ocean movement to the genetic structure of island populations

(2015) E. L. Harradine et al.   CONSERVATION BIOLOGY

Niche breadth and geographic range size as determinants of species survival on geological time scales

(2015) Erin E. Saupe et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Comparative genetic structure of sympatric leporids in southern Illinois

(2015) Leah K. Berkman et al.   JOURNAL OF MAMMALOGY

Multilocus phylogeography of a widespread savanna-woodland-adapted rodent reveals the influence of Pleistocene geomorphology and climate change in Africa's Zambezi region

(2015) Molly M. McDonough et al.   MOLECULAR ECOLOGY

Exon capture phylogenomics: efficacy across scales of divergence

(2015) Jason G. Bragg et al.   Molecular Ecology Resources

A new species of death adder (Acanthophis: Serpentes: Elapidae) from north-western Australia

(2015) SIMON T. MADDOCK et al.   ZOOTAXA

Contrasting genetic diversity and population structure among three sympatric Madagascan shorebirds: parallels with rarity, endemism, and dispersal

(2015) Luke J. Eberhart-Phillips et al.   Ecology and Evolution

Pleistocene Niche Stability and Lineage Diversification in the Subtropical Spider Araneus omnicolor (Araneidae)

(2015) Elen A. Peres et al.   PLoS One

Long-term persistence and vicariance within the Australian Monsoonal Tropics: the case of the giant cave and tree geckos (Pseudothecadactylus)

(2014) Paul M. Oliver et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

Taxonomy of rock-wallabies, Petrogale (Marsupialia: Macropodidae). IV. Multifaceted study of the brachyotis group identifies additional taxa

(2014) Sally Potter et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

ASTRAL: genome-scale coalescent-based species tree estimation

(2014) S. Mirarab et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Biogeography of the Kimberley, Western Australia: a review of landscape evolution and biotic response in an ancient refugium

(2014) Mitzy Pepper et al.   JOURNAL OF BIOGEOGRAPHY

Conservation status of ants in an iconic region of monsoonal Australia: levels of endemism and responses to fire in the eastern Kimberley

(2014) Alan N. Andersen et al.   JOURNAL OF INSECT CONSERVATION

Climate, physiological tolerance and sex-biased dispersal shape genetic structure of Neotropical orchid bees

(2014) Margarita M. López-Uribe et al.   MOLECULAR ECOLOGY

Aridification drove repeated episodes of diversification between Australian biomes: Evidence from a multi-locus phylogeny of Australian toadlets (Uperoleia: Myobatrachidae)

(2014) Renee A. Catullo et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic disassembly of species boundaries in a widespread group of Australian skinks (Scincidae: Ctenotus)

(2014) Daniel L. Rabosky et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Independent Transitions between Monsoonal and Arid Biomes Revealed by Systematic Revison of a Complex of Australian Geckos (Diplodactylus; Diplodactylidae)

(2014) Paul M. Oliver et al.   PLoS One

A new species of Velvet Gecko (Oedura: Diplodactylidae) from the limestone ranges of the southern Kimberley, Western Australia

(2014) PAUL M. OLIVER et al.   ZOOTAXA

Broadscale phylogeographic structure of five freshwater fishes across the Australian Monsoonal Tropics

(2014) Joel A. Huey et al.   Freshwater Science

Phenotypic Integration in Response to Incubation Environment Adaptively Influences Habitat Choice in a Tropical Lizard

(2013) Brett A. Goodman et al.   AMERICAN NATURALIST

Hidden species diversity of Australian burrowing snakes (Ramphotyphlops)

(2013) Julie Marin et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Niche breadth predicts geographical range size: a general ecological pattern

(2013) Rachel A. Slatyer et al.   ECOLOGY LETTERS

DETECTING RANGE EXPANSIONS FROM GENETIC DATA

(2013) Benjamin M. Peter et al.   EVOLUTION

Inferring population size changes with sequence and SNP data: lessons from human bottlenecks

(2013) L M Gattepaille et al.   HEREDITY

The biogeographical boundaries of northern Australia: evidence from ecological niche models and a multi-locus phylogeny ofUperoleiatoadlets (Anura: Myobatrachidae)

(2013) Renee A. Catullo et al.   JOURNAL OF BIOGEOGRAPHY

De novotranscriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set

(2013) Sonal Singhal   Molecular Ecology Resources

Evaluating the Significance of Paleophylogeographic Species Distribution Models in Reconstructing Quaternary Range-Shifts of Nearctic Chelonians

(2013) Dennis Rödder et al.   PLoS One

Reproductive isolation between phylogeographic lineages scales with divergence

(2013) S. Singhal et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Palaeoenvironmental change in tropical Australasia over the last 30,000 years – a synthesis by the OZ-INTIMATE group

(2013) Jessica M. Reeves et al.   QUATERNARY SCIENCE REVIEWS

A Last Glacial Maximum through middle Holocene stalagmite record of coastal Western Australia climate

(2013) Rhawn F. Denniston et al.   QUATERNARY SCIENCE REVIEWS

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales

(2012) Ke Bi et al.   BMC GENOMICS

Evolutionary history of Scinax treefrogs on land-bridge islands in south-eastern Brazil

(2012) Rayna C. Bell et al.   JOURNAL OF BIOGEOGRAPHY

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Testing hypotheses for genealogical discordance in a rainforest lizard

(2012) Sonal Singhal et al.   MOLECULAR ECOLOGY

Multiple biogeographical barriers identified across the monsoon tropics of northern Australia: phylogeographic analysis of thebrachyotisgroup of rock-wallabies

(2012) SALLY POTTER et al.   MOLECULAR ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Predicting organismal vulnerability to climate warming: roles of behaviour, physiology and adaptation

(2012) R. B. Huey et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Extending the Cost-Benefit Model of Thermoregulation: High-Temperature Environments

(2011) Mathew Vickers et al.   AMERICAN NATURALIST

Molecular evidence for ten species and Oligo-Miocene vicariance within a nominal Australian gecko species (Crenadactylus ocellatus, Diplodactylidae)

(2011) Paul M Oliver et al.   BMC EVOLUTIONARY BIOLOGY

Palaeoclimate change drove diversification among isolated mountain refugia in the Australian arid zone

(2011) MITZY PEPPER et al.   MOLECULAR ECOLOGY

Predictable Variation of Range-Sizes across an Extreme Environmental Gradient in a Lizard Adaptive Radiation: Evolutionary and Ecological Inferences

(2011) Daniel Pincheira-Donoso   PLoS One

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

EVIDENCE OF CONSTRAINED PHENOTYPIC EVOLUTION IN A CRYPTIC SPECIES COMPLEX OF AGAMID LIZARDS

(2010) Katie L. Smith et al.   EVOLUTION

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Revisiting the historical distribution of Seasonally Dry Tropical Forests: new insights based on palaeodistribution modelling and palynological evidencegeb

(2010) Fernanda P. Werneck et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Climatic stability and genetic divergence in the tropical insular lizardAnolis krugi, the Puerto Rican ‘Lagartijo Jardinero de la Montaña’

(2010) JAVIER A. RODRÍGUEZ-ROBLES et al.   MOLECULAR ECOLOGY

Evolutionary origins and diversification of dragon lizards in Australia’s tropical savannas

(2010) J. Melville et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Global analysis of thermal tolerance and latitude in ectotherms

(2010) J. M. Sunday et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Uncovering local endemism in the Kimberley, Western Australia: description of new species of the genus Amplirhagada Iredale, 1933 (Pulmonata: Camaenidae)

(2010) Frank Köhler   RECORDS OF THE AUSTRALIAN MUSEUM

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Vertebrate range sizes indicate that mountains may be ‘higher’ in the tropics

(2009) Christy M. McCain   ECOLOGY LETTERS

Mechanistic niche modelling: combining physiological and spatial data to predict species’ ranges

(2009) Michael Kearney et al.   ECOLOGY LETTERS

Processes driving male breeding colour and ecomorphological diversification in rainbow skinks: a phylogenetic comparative test

(2009) Gaynor Dolman et al.   EVOLUTIONARY ECOLOGY

Biogeography of the Australian monsoon tropics

(2009) D. M. J. S. Bowman et al.   JOURNAL OF BIOGEOGRAPHY

Variable responses of skinks to a common history of rainforest fluctuation: concordance between phylogeography and palaeo-distribution models

(2009) ADNAN MOUSSALLI et al.   MOLECULAR ECOLOGY

Why tropical forest lizards are vulnerable to climate warming

(2009) R. B. Huey et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fundamental Evolutionary Limits in Ecological Traits Drive Drosophila Species Distributions

(2009) V. Kellermann et al.   SCIENCE

Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data

(2009) Ryan N. Gutenkunst et al.   PLoS Genetics

Biogeography of butterflies in the Australian monsoon tropics

(2008) Michael F. Braby   AUSTRALIAN JOURNAL OF ZOOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Combined mitochondrial and nuclear data enhance resolution of a rapid radiation of Australian rainbow skinks (Scincidae: Carlia)

(2008) G DOLMAN et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Impacts of climate warming on terrestrial ectotherms across latitude

(2008) C. A. Deutsch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA