Genomic variation across two barn swallow hybrid zones reveals traits associated with divergence in sympatry and allopatry

Differential introgression and the maintenance of species boundaries in an advanced generation avian hybrid zone

(2016) Jennifer Walsh et al.   BMC EVOLUTIONARY BIOLOGY

Plumage Genes and Little Else Distinguish the Genomes of Hybridizing Warblers

(2016) David P.L. Toews et al.   CURRENT BIOLOGY

The maintenance of phenotypic divergence through sexual selection: An experimental study in barn swallowsHirundo rustica

(2016) Rebecca J. Safran et al.   EVOLUTION

Hybridization following recent secondary contact results in asymmetric genotypic and phenotypic introgression between island species ofMyzomelahoneyeaters

(2016) Jason M. Sardell et al.   EVOLUTION

What, if anything, are hybrids: enduring truths and challenges associated with population structure and gene flow

(2016) Zachariah Gompert et al.   Evolutionary Applications

Assessing reproductive isolation using a contact zone between parapatric lake-stream stickleback ecotypes

(2016) D. Hanson et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Disruptive selection without genome-wide evolution across a migratory divide

(2016) Jan A.C. von Rönn et al.   MOLECULAR ECOLOGY

Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation

(2016) R. J. Safran et al.   MOLECULAR ECOLOGY

Distinguishing contemporary hybridization from past introgression with postgenomic ancestry-informative SNPs in strongly differentiated Ciona species

(2016) Sarah Bouchemousse et al.   MOLECULAR ECOLOGY

Heterogeneous genome divergence, differential introgression, and the origin and structure of hybrid zones

(2016) Richard G. Harrison et al.   MOLECULAR ECOLOGY

A genomic perspective on hybridization and speciation

(2016) Bret A. Payseur et al.   MOLECULAR ECOLOGY

pcadapt: anRpackage to perform genome scans for selection based on principal component analysis

(2016) Keurcien Luu et al.   Molecular Ecology Resources

Recombination Rate Evolution and the Origin of Species

(2016) Daniel Ortiz-Barrientos et al.   TRENDS IN ECOLOGY & EVOLUTION

Detecting Polygenic Evolution: Problems, Pitfalls, and Promises

(2016) Maren Wellenreuther et al.   TRENDS IN GENETICS

Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST

(2015) Michael C. Whitlock et al.   AMERICAN NATURALIST

The genetic architecture of hybrid incompatibilities and their effect on barriers to introgression in secondary contact

(2015) Dorothea Lindtke et al.   EVOLUTION

Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum ofFicedulaflycatchers

(2015) Reto Burri et al.   GENOME RESEARCH

The relative power of genome scans to detect local adaptation depends on sampling design and statistical method

(2015) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Fifteen years of genomewide scans for selection: trends, lessons and unaddressed genetic sources of complication

(2015) Ryan J. Haasl et al.   MOLECULAR ECOLOGY

Genotype-environment associations support a mosaic hybrid zone between two tidal marsh birds

(2015) Jennifer Walsh et al.   Ecology and Evolution

Climate-Mediated Movement of an Avian Hybrid Zone

(2014) Scott A. Taylor et al.   CURRENT BIOLOGY

Hybrid songbirds employ intermediate routes in a migratory divide

(2014) Kira E. Delmore et al.   ECOLOGY LETTERS

GENOMIC AND MORPHOLOGICAL ANALYSIS OF A SEMIPERMEABLE AVIAN HYBRID ZONE SUGGESTS ASYMMETRICAL INTROGRESSION OF A SEXUAL SIGNAL

(2014) Daniel T. Baldassarre et al.   EVOLUTION

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Admixture and the organization of genetic diversity in a butterfly species complex revealed through common and rare genetic variants

(2014) Zachariah Gompert et al.   MOLECULAR ECOLOGY

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

Estimation of linkage disequilibrium and interspecific gene flow inFicedulaflycatchers by a newly developed 50k single-nucleotide polymorphism array

(2014) Takeshi Kawakami et al.   Molecular Ecology Resources

Genomic divergence in a ring species complex

(2014) Miguel Alcaide et al.   NATURE

Genomics and the origin of species

(2014) Ole Seehausen et al.   NATURE REVIEWS GENETICS

Geographic variation in sexual selection and implications for speciation in the Barn Swallow

(2014) Elizabeth SC Scordato et al.   Avian Research

GENETIC HITCHHIKING AND THE DYNAMIC BUILDUP OF GENOMIC DIVERGENCE DURING SPECIATION WITH GENE FLOW

(2013) Samuel M. Flaxman et al.   EVOLUTION

Hybridization and speciation

(2013) R. Abbott et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The genomic consequences of adaptive divergence and reproductive isolation between species of manakins

(2013) T. L. Parchman et al.   MOLECULAR ECOLOGY

Gene flow and the maintenance of species boundaries

(2013) Erica L. Larson et al.   MOLECULAR ECOLOGY

hzar: hybrid zone analysis using an R software package

(2013) Elizabeth P. Derryberry et al.   Molecular Ecology Resources

GENOMIC REGIONS WITH A HISTORY OF DIVERGENT SELECTION AFFECT FITNESS OF HYBRIDS BETWEEN TWO BUTTERFLY SPECIES

(2012) Zachariah Gompert et al.   EVOLUTION

Physiological adaptation along environmental gradients and replicated hybrid zone structure in swordtails (Teleostei: Xiphophorus)

(2012) Z.W. Culumber et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Genomic and phenotypic architecture of a spruce hybrid zone (Picea sitchensis × P. glauca)

(2012) Jill A. Hamilton et al.   MOLECULAR ECOLOGY

Genome-wide association genetics of an adaptive trait in lodgepole pine

(2012) THOMAS L. PARCHMAN et al.   MOLECULAR ECOLOGY

The genomics of speciation-with-gene-flow

(2012) Jeffrey L. Feder et al.   TRENDS IN GENETICS

Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone

(2011) LIUYANG WANG et al.   MOLECULAR ECOLOGY

The coupling hypothesis: why genome scans may fail to map local adaptation genes

(2011) NICOLAS BIERNE et al.   MOLECULAR ECOLOGY

Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice

(2011) M. W. Nachman et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomics of isolation in hybrids

(2011) Z. Gompert et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Replicated hybrid zones of Xiphophorus swordtails along an elevational gradient

(2010) Z. W. CULUMBER et al.   MOLECULAR ECOLOGY

Secondary contact between Lycaeides idas and L. melissa in the Rocky Mountains: extensive admixture and a patchy hybrid zone

(2010) Zachariah Gompert et al.   MOLECULAR ECOLOGY

Phylogeny of the genus Hirundo and the Barn Swallow subspecies complex

(2010) Roi Dor et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Positive Carotenoid Balance Correlates with Greater Reproductive Performance in a Wild Bird

(2010) Rebecca J. Safran et al.   PLoS One

Contemporary Evolution of Reproductive Isolation and Phenotypic Divergence in Sympatry along a Migratory Divide

(2009) Gregor Rolshausen et al.   CURRENT BIOLOGY

Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species

(2009) M A F Noor et al.   HEREDITY

A powerful regression-based method for admixture mapping of isolation across the genome of hybrids

(2009) ZACHARIAH GOMPERT et al.   MOLECULAR ECOLOGY

Genetic, morphological, and feather isotope variation of migratory willow warblers show gradual divergence in a ring

(2009) STAFFAN BENSCH et al.   MOLECULAR ECOLOGY

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates

(2008) K. Strimmer   BIOINFORMATICS

COMPARING CLINES ON MOLECULAR AND PHENOTYPIC TRAITS IN HYBRID ZONES: A WINDOW ON TENSION ZONE MODELS

(2008) Laurène Gay et al.   EVOLUTION

NATURAL SELECTION ALONG AN ENVIRONMENTAL GRADIENT: A CLASSIC CLINE IN MOUSE PIGMENTATION

(2008) Lynne M. Mullen et al.   EVOLUTION

Reproductive isolation among two interfertile Rhododendron species: low frequency of post-F1 hybrid genotypes in alpine hybrid zones

(2008) RICHARD I. MILNE et al.   MOLECULAR ECOLOGY

Admixture as the basis for genetic mapping

(2008) C. Alex Buerkle et al.   TRENDS IN ECOLOGY & EVOLUTION