Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation

Disruptive selection without genome-wide evolution across a migratory divide

(2016) Jan A.C. von Rönn et al.   MOLECULAR ECOLOGY

A robust new metric of phenotypic distance to estimate and compare multiple trait differences among populations

(2016) Rebecca Safran et al.   Current Zoology

Speciation by selection: A framework for understanding ecology’s role in speciation

(2016) R. Brian Langerhans et al.   Current Zoology

Resource specialists lead local insect community turnover associated with temperature - analysis of an 18-year full-seasonal record of moths and beetles

(2015) Philip Francis Thomsen et al.   JOURNAL OF ANIMAL ECOLOGY

Differentially expressed genes match bill morphology and plumage despite largely undifferentiated genomes in a Holarctic songbird

(2015) Nicholas A. Mason et al.   MOLECULAR ECOLOGY

Highly variable reproductive isolation among pairs ofCatostomusspecies

(2015) Elizabeth G. Mandeville et al.   MOLECULAR ECOLOGY

Genomic analysis of a migratory divide reveals candidate genes for migration and implicates selective sweeps in generating islands of differentiation

(2015) Kira E. Delmore et al.   MOLECULAR ECOLOGY

Whole-genome resequencing of extreme phenotypes in collared flycatchers highlights the difficulty of detecting quantitative trait loci in natural populations

(2015) Marty Kardos et al.   Molecular Ecology Resources

Quantitative genetics of plumage color: lifetime effects of early nest environment on a colorful sexual signal

(2015) Joanna K. Hubbard et al.   Ecology and Evolution

How populations differentiate despite gene flow: sexual and natural selection drive phenotypic divergence within a land fish, the Pacific leaping blenny

(2014) Courtney L Morgans et al.   BMC EVOLUTIONARY BIOLOGY

Hybrid songbirds employ intermediate routes in a migratory divide

(2014) Kira E. Delmore et al.   ECOLOGY LETTERS

GENOMIC AND MORPHOLOGICAL ANALYSIS OF A SEMIPERMEABLE AVIAN HYBRID ZONE SUGGESTS ASYMMETRICAL INTROGRESSION OF A SEXUAL SIGNAL

(2014) Daniel T. Baldassarre et al.   EVOLUTION

The Role of Ecology in Speciation by Sexual Selection: A Systematic Empirical Review

(2014) Elizabeth S. C. Scordato et al.   JOURNAL OF HEREDITY

Admixture and the organization of genetic diversity in a butterfly species complex revealed through common and rare genetic variants

(2014) Zachariah Gompert et al.   MOLECULAR ECOLOGY

Isolation by environment

(2014) Ian J. Wang et al.   MOLECULAR ECOLOGY

A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution

(2014) Takeshi Kawakami et al.   MOLECULAR ECOLOGY

Genomics and the origin of species

(2014) Ole Seehausen et al.   NATURE REVIEWS GENETICS

Comparative genomics reveals insights into avian genome evolution and adaptation

(2014) G. Zhang et al.   SCIENCE

The genomic landscape underlying phenotypic integrity in the face of gene flow in crows

(2014) J. W. Poelstra et al.   SCIENCE

The magnitude of behavioral isolation is affected by characteristics of the mating community

(2014) Daniel R. Matute   Ecology and Evolution

Geographic variation in sexual selection and implications for speciation in the Barn Swallow

(2014) Elizabeth SC Scordato et al.   Avian Research

Multiple Sexual Signals and Behavioral Reproductive Isolation in a Diverging Population

(2013) Yoni Vortman et al.   AMERICAN NATURALIST

The Evolutionary Genomics of Birds

(2013) Hans Ellegren   Annual Review of Ecology Evolution and Systematics

The role of ecological variation in driving divergence of sexual and non-sexual traits in the red-backed fairy-wren (Malurus melanocephalus)

(2013) Daniel T Baldassarre et al.   BMC EVOLUTIONARY BIOLOGY

Widespread evidence for incipient ecological speciation: a meta-analysis of isolation-by-ecology

(2013) Aaron B. A. Shafer et al.   ECOLOGY LETTERS

DISENTANGLING THE EFFECTS OF GEOGRAPHIC AND ECOLOGICAL ISOLATION ON GENETIC DIFFERENTIATION

(2013) Gideon S. Bradburd et al.   EVOLUTION

Mantel test in population genetics

(2013) José Alexandre F. Diniz-Filho et al.   GENETICS AND MOLECULAR BIOLOGY

Genetic diversity and morphological variation of the common chaffinchFringilla coelebsin the Azores

(2013) Pedro Rodrigues et al.   JOURNAL OF AVIAN BIOLOGY

The genomic consequences of adaptive divergence and reproductive isolation between species of manakins

(2013) T. L. Parchman et al.   MOLECULAR ECOLOGY

Environmental harshness is positively correlated with intraspecific divergence in mammals and birds

(2013) Carlos A. Botero et al.   MOLECULAR ECOLOGY

Sexual Dimorphism in Melanin Pigmentation, Feather Coloration and Its Heritability in the Barn Swallow (Hirundo rustica)

(2013) Nicola Saino et al.   PLoS One

Sexual selection accelerates signal evolution during speciation in birds

(2013) N. Seddon et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Contributions of natural and sexual selection to the evolution of premating reproductive isolation: a research agenda

(2013) Rebecca J. Safran et al.   TRENDS IN ECOLOGY & EVOLUTION

Quantifying the roles of ecology and geography in spatial genetic divergence

(2012) Ian J. Wang et al.   ECOLOGY LETTERS

GENOMIC REGIONS WITH A HISTORY OF DIVERGENT SELECTION AFFECT FITNESS OF HYBRIDS BETWEEN TWO BUTTERFLY SPECIES

(2012) Zachariah Gompert et al.   EVOLUTION

Population differentiation and restricted gene flow in Spanish crossbills: not isolation-by-distance but isolation-by-ecology

(2012) P. EDELAAR et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Population genomics based on low coverage sequencing: how low should we go?

(2012) C. Alex Buerkle et al.   MOLECULAR ECOLOGY

Genome-wide association genetics of an adaptive trait in lodgepole pine

(2012) THOMAS L. PARCHMAN et al.   MOLECULAR ECOLOGY

Characterizing genomic variation ofArabidopsis thaliana: the roles of geography and climate

(2012) JESSE R. LASKY et al.   MOLECULAR ECOLOGY

Ecological opportunity and sexual selection together predict adaptive radiation

(2012) Catherine E. Wagner et al.   NATURE

Genomic consequences of multiple speciation processes in a stick insect

(2012) P. Nosil et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Dramatic intraspecific differences in migratory routes, stopover sites and wintering areas, revealed using light-level geolocators

(2012) K. E. Delmore et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The sexual signals of the East-Mediterranean barn swallow: a different swallow tale

(2011) Y. Vortman et al.   BEHAVIORAL ECOLOGY

Ecology, sexual selection and speciation

(2011) Martine E. Maan et al.   ECOLOGY LETTERS

Population Genetics and Morphological Comparisons of Migratory European (Hirundo rustica rustica) and Sedentary East-Mediterranean (Hirundo rustica transitiva) Barn Swallows

(2011) Roi Dor et al.   JOURNAL OF HEREDITY

Quantifying effects of environmental and geographical factors on patterns of genetic differentiation

(2011) CHENG-RUEI LEE et al.   MOLECULAR ECOLOGY

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

What do we need to know about speciation?

(2011)   TRENDS IN ECOLOGY & EVOLUTION

Sexual selection and speciation: the comparative evidence revisited

(2010) Ken Kraaijeveld et al.   BIOLOGICAL REVIEWS

The role of genotype-by-environment interactions in sexual selection

(2010) F. C. INGLEBY et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data

(2010) PIERRE LEGENDRE et al.   Molecular Ecology Resources

Phylogeny of the genus Hirundo and the Barn Swallow subspecies complex

(2010) Roi Dor et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Differences in the temporal dynamics of phenotypic selection among fitness components in the wild

(2010) A. M. Siepielski et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Contemporary Evolution of Reproductive Isolation and Phenotypic Divergence in Sympatry along a Migratory Divide

(2009) Gregor Rolshausen et al.   CURRENT BIOLOGY

Climatic Patterns Predict the Elaboration of Song Displays in Mockingbirds

(2009) Carlos A. Botero et al.   CURRENT BIOLOGY

Genetic structure is correlated with phenotypic divergence rather than geographic isolation in the highly polymorphic strawberry poison-dart frog

(2009) IAN J. WANG et al.   MOLECULAR ECOLOGY

On the Origin of Species by Natural and Sexual Selection

(2009) G. S. van Doorn et al.   SCIENCE

Evidence for Ecological Speciation and Its Alternative

(2009) D. Schluter   SCIENCE

HETEROGENEOUS GENOMIC DIFFERENTIATION BETWEEN WALKING-STICK ECOTYPES: "ISOLATION BY ADAPTATION" AND MULTIPLE ROLES FOR DIVERGENT SELECTION

(2008) Patrik Nosil et al.   EVOLUTION

A Gene-Based Genetic Linkage Map of the Collared Flycatcher (Ficedula albicollis) Reveals Extensive Synteny and Gene-Order Conservation During 100 Million Years of Avian Evolution

(2008) N. Backstrom et al.   GENETICS

Genome size and wing parameters in passerine birds

(2008) C. B Andrews et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

GENETIC, MORPHOLOGICAL, AND ECOLOGICAL CHARACTERIZATION OF A HYBRID ZONE THAT SPANS A MIGRATORY DIVIDE

(2007) Kristen Ruegg   EVOLUTION