Improving accuracy of breeding values by incorporating genomic information in spatial-competition mixed models

Single-Step BLUP with Varying Genotyping Effort in Open-Pollinated Picea glauca

(2017) Blaise Ratcliffe et al.   G3-Genes Genomes Genetics

SSRs, SNPs and DArTs comparison on estimation of relatedness and genetic parameters’ precision from a small half-sib sample population of Eucalyptus grandis

(2016) Eduardo P. Cappa et al.   MOLECULAR BREEDING

Identification and joint modeling of competition effects and environmental heterogeneity in three Douglas-fir (Pseudotsuga menziesii var. menziesii) trials

(2016) Eduardo P. Cappa et al.   Tree Genetics & Genomes

Implementation of the Realized Genomic Relationship Matrix to Open-Pollinated White Spruce Family Testing for Disentangling Additive from Nonadditive Genetic Effects

(2016) Omnia Gamal El-Dien et al.   G3-Genes Genomes Genetics

Estimates of genetic variance and variance of predicted genetic merits using pedigree or genomic relationship matrices in six Brown Swiss cattle populations for different traits

(2015) A. Loberg et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

A novel individual-tree mixed model to account for competition and environmental heterogeneity: a Bayesian approach

(2015) Eduardo Pablo Cappa et al.   Tree Genetics & Genomes

Unraveling Additive from Nonadditive Effects Using Genomic Relationship Matrices

(2014) Patricio R. Muñoz et al.   GENETICS

Accuracy of genomic selection models in a large population of open-pollinated families in white spruce

(2014) J Beaulieu et al.   HEREDITY

Genomic prediction in Japanese Black cattle: Application of a single-step approach to beef cattle

(2014) A. Onogi et al.   JOURNAL OF ANIMAL SCIENCE

Single Step, a general approach for genomic selection

(2014) Andres Legarra et al.   Livestock Science

Genomic selection in forest tree breeding: the concept and an outlook to the future

(2014) Fikret Isik   NEW FORESTS

Assessment of accuracy of genomic prediction for French Lacaune dairy sheep

(2013) G. Baloche et al.   JOURNAL OF DAIRY SCIENCE

Estimates of genetic parameters and breeding values from western larch open-pollinated families using marker-based relationship

(2013) Jaroslav Klápště et al.   Tree Genetics & Genomes

Increased Genomic Prediction Accuracy in Wheat Breeding Through Spatial Adjustment of Field Trial Data

(2013) Bettina Lado et al.   G3-Genes Genomes Genetics

Genomic Estimated Breeding Values Using Genomic Relationship Matrices in a Cloned Population of Loblolly Pine

(2013) Jaime Zapata-Valenzuela et al.   G3-Genes Genomes Genetics

Single-step methods for genomic evaluation in pigs

(2012) O. F. Christensen et al.   Animal

Breeding without breeding: selection using the genomic best linear unbiased predictor method (GBLUP)

(2012) Yousry A. El-Kassaby et al.   NEW FORESTS

Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees

(2012) Marcos D. V. Resende et al.   NEW PHYTOLOGIST

Genetic control of interactions among individuals: contrasting outcomes of indirect genetic effects arising from neighbour disease infection and competition in a forest tree

(2012) João Costa e Silva et al.   NEW PHYTOLOGIST

Accounting for competition in genetic analysis, with particular emphasis on forest genetic trials

(2012) João Costa e Silva et al.   Tree Genetics & Genomes

Bias in genomic predictions for populations under selection

(2011) Z. G. VITEZICA et al.   Genetics Research

The unified approach to the use of genomic and pedigree information in genomic evaluations revisited

(2011) T.H.E. Meuwissen et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Evaluation of the utility of diagonal elements of the genomic relationship matrix as a diagnostic tool to detect mislabelled genotyped animals in a broiler chicken population

(2011) R. Simeone et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Effect of different genomic relationship matrices on accuracy and scale1

(2011) C. Y. Chen et al.   JOURNAL OF ANIMAL SCIENCE

Use of a reduced set of single nucleotide polymorphisms for genetic evaluation of resistance to Salmonella carrier state in laying hens

(2011) A. Legarra et al.   POULTRY SCIENCE

Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score1

(2010) I. Aguilar et al.   JOURNAL OF DAIRY SCIENCE

Reconciling the analysis of IBD and IBS in complex trait studies

(2010) Joseph E. Powell et al.   NATURE REVIEWS GENETICS

A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus

(2010) Carolina P Sansaloni et al.   Plant Methods

Genomic selection in forest tree breeding

(2010) Dario Grattapaglia et al.   Tree Genetics & Genomes

Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

(2009) I. Misztal et al.   JOURNAL OF DAIRY SCIENCE

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Accuracy of Genomic Selection Using Different Methods to Define Haplotypes

(2008) M. P. L. Calus et al.   GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Efficiency of using spatial analysis in first-generation coastal Douglas-fir progeny tests in the US Pacific Northwest

(2008) Terrance Z. Ye et al.   Tree Genetics & Genomes