Spatial and Temporal Scales of Range Expansion in Wild Phaseolus vulgaris

Low stomatal sensitivity to vapor pressure deficit in irrigated common, lima and tepary beans

(2017) Viviana Medina et al.   FIELD CROPS RESEARCH

A new species of Phaseolus (Leguminosae, Papilionoideae) sister to Phaseolus vulgaris, the common bean

(2017) MARTHA RENDÓN-ANAYA et al.   Phytotaxa

Impact of imputation methods on the amount of genetic variation captured by a single-nucleotide polymorphism panel in soybeans

(2016) A. Xavier et al.   BMC BIOINFORMATICS

Genome-wide identification of SNPs and copy number variation in common bean (Phaseolus vulgaris L.) using genotyping-by-sequencing (GBS)

(2016) Andrea Ariani et al.   MOLECULAR BREEDING

Convergence of broad-scale migration strategies in terrestrial birds

(2016) Frank A. La Sorte et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Overseas seed dispersal by migratory birds

(2016) Duarte S. Viana et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

TESS3: fast inference of spatial population structure and genome scans for selection

(2015) Kevin Caye et al.   Molecular Ecology Resources

Landscape genetics, adaptive diversity and population structure inPhaseolus vulgaris

(2015) Monica Rodriguez et al.   NEW PHYTOLOGIST

SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data

(2014) Tae-Ho Lee et al.   BMC GENOMICS

In situ conservation of the wild relative of the common bean (Phaseolus vulgaris var. aborigineus) at the south of its neotropical distribution: environmental characterization of a population in central Argentina

(2014) H. Sirolli et al.   GENETIC RESOURCES AND CROP EVOLUTION

A reference genome for common bean and genome-wide analysis of dual domestications

(2014) Jeremy Schmutz et al.   NATURE GENETICS

Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean

(2014) E. Bellucci et al.   PLANT CELL

Global late Quaternary megafauna extinctions linked to humans, not climate change

(2014) C. Sandom et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Conservation of fruit dehiscence pathways betweenLepidium campestreandArabidopsis thalianasheds light on the regulation ofINDEHISCENT

(2013) Teresa Lenser et al.   PLANT JOURNAL

Drought Tolerance in Wild Plant Populations: The Case of Common Beans (Phaseolus vulgaris L.)

(2013) Andrés J. Cortés et al.   PLoS One

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

Demographic factors shaped diversity in the two gene pools of wild common bean Phaseolus vulgaris L.

(2012) S Mamidi et al.   HEREDITY

Molecular analysis of the parallel domestication of the common bean (Phaseolus vulgaris) in Mesoamerica and the Andes

(2012) Elena Bitocchi et al.   NEW PHYTOLOGIST

Diversification and Population Structure in Common Beans (Phaseolus vulgaris L.)

(2012) Matthew W. Blair et al.   PLoS One

Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data

(2012) E. Bitocchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Crop Wild Relatives—Undervalued, Underutilized and under Threat?

(2011) Brian V. Ford-Lloyd et al.   BIOSCIENCE

DendroPy: a Python library for phylogenetic computing

(2010) J. Sukumaran et al.   BIOINFORMATICS

ABCtoolbox: a versatile toolkit for approximate Bayesian computations

(2010) Daniel Wegmann et al.   BMC BIOINFORMATICS

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Genetic signals of origin, spread, and introgression in a large sample of maize landraces

(2010) J. van Heerwaarden et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Gene pools in wild Lima bean (Phaseolus lunatus L.) from the Americas: Evidences for an Andean origin and past migrations

(2009) Martha L. Serrano-Serrano et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Major Soybean QTL, qPDH1, Controls Pod Dehiscence without Marked Morphological Change

(2009) Masaya Suzuki et al.   PLANT PRODUCTION SCIENCE

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS