Quantitative Temporal Viromics of an Inducible HIV-1 Model Yields Insight to Global Host Targets and Phospho-Dynamics Associated with Protein Vpr

Sweden, the first country to achieve the Joint United Nations Programme on HIV/AIDS (UNAIDS)/World Health Organization (WHO) 90-90-90 continuum of HIV care targets

(2016) M Gisslén et al.   HIV MEDICINE

HIV-1 Vpr degrades the HLTF DNA translocase in T cells and macrophages

(2016) Hichem Lahouassa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HIV-1 and HIV-2 exhibit divergent interactions with HLTF and UNG2 DNA repair proteins

(2016) Kasia Hrecka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Remodeling of the Host Cell Plasma Membrane by HIV-1 Nef and Vpu: A Strategy to Ensure Viral Fitness and Persistence

(2016) Scott Sugden et al.   Viruses-Basel

Temporal proteomic analysis of HIV infection reveals remodelling of the host phosphoproteome by lentiviral Vif variants

(2016) Edward JD Greenwood et al.   eLife

Proteomic analysis of pRb loss highlights a signature of decreased mitochondrial oxidative phosphorylation

(2015) Brandon N. Nicolay et al.   GENES & DEVELOPMENT

HIV-1 Vpr Protein Enhances Proteasomal Degradation of MCM10 DNA Replication Factor through the Cul4-DDB1[VprBP] E3 Ubiquitin Ligase to Induce G2/M Cell Cycle Arrest

(2015) Bizhan Romani et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Intrinsic host restrictions to HIV-1 and mechanisms of viral escape

(2015) Viviana Simon et al.   NATURE IMMUNOLOGY

SR protein kinases promote splicing of nonconsensus introns

(2015) Jesse J Lipp et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Proteomics in the investigation of HIV-1 interactions with host proteins

(2015) Ming Li   Proteomics Clinical Applications

SR protein kinases promote splicing of nonconsensus introns

(2015) Jesse J Lipp et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Tetracyclines Disturb Mitochondrial Function across Eukaryotic Models: A Call for Caution in Biomedical Research

(2015) Norman Moullan et al.   Cell Reports

MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes

(2014) Graeme C. McAlister et al.   ANALYTICAL CHEMISTRY

Premature Activation of the SLX4 Complex by Vpr Promotes G2/M Arrest and Escape from Innate Immune Sensing

(2014) Nadine Laguette et al.   CELL

HIV-1, human interaction database: current status and new features

(2014) Danso Ako-Adjei et al.   NUCLEIC ACIDS RESEARCH

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Cyclin D activates the Rb tumor suppressor by mono-phosphorylation

(2014) Anil M Narasimha et al.   eLife

Quantitative Proteomics Using Reductive Dimethylation for Stable Isotope Labeling

(2014) Andrew C. Tolonen et al.   Jove-Journal of Visualized Experiments

Quantitative Phosphoproteomics Reveals Extensive Cellular Reprogramming during HIV-1 Entry

(2013) Jason A. Wojcechowskyj et al.   Cell Host & Microbe

Evaluation of HCD- and CID-type Fragmentation Within Their Respective Detection Platforms For Murine Phosphoproteomics

(2011) Mark P. Jedrychowski et al.   MOLECULAR & CELLULAR PROTEOMICS

MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

(2011) Lily Ting et al.   NATURE METHODS

Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

(2011) Yuexi Wang et al.   PROTEOMICS

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

(2010) Edward L. Huttlin et al.   CELL

Cdk2 Is Required for p53-Independent G2/M Checkpoint Control

(2010) Jon H. Chung et al.   PLoS Genetics

Formation of Mobile Chromatin-Associated Nuclear Foci Containing HIV-1 Vpr and VPRBP Is Critical for the Induction of G2 Cell Cycle Arrest

(2010) Jean-Philippe Belzile et al.   PLoS Pathogens

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Regulation of Cyclin D1 RNA Stability by SNIP1

(2008) C. P. Bracken et al.   CANCER RESEARCH

HIV-1 Accessory Proteins—Ensuring Viral Survival in a Hostile Environment

(2008) Michael H. Malim et al.   Cell Host & Microbe

HIV-1 Vpr: Mechanisms of G2 arrest and apoptosis

(2008) Joshua L. Andersen et al.   EXPERIMENTAL AND MOLECULAR PATHOLOGY

DrosophilaMFAP1 Is Required for Pre-mRNA Processing and G2/M Progression

(2008) Ditte S. Andersen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry

(2008) Judit Villén et al.   Nature Protocols

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH