Identifying Host Factors Associated with DNA Replicated During Virus Infection

Morphological, Biochemical, and Functional Study of Viral Replication Compartments Isolated from Adenovirus-Infected Cells

(2016) Paloma Hidalgo et al.   JOURNAL OF VIROLOGY

The Adenovirus E4-ORF3 Protein Stimulates SUMOylation of General Transcription Factor TFII-I to Direct Proteasomal Degradation

(2016) Rebecca G. Bridges et al.   mBio

The Human Adenovirus Type 5 L4 Promoter Is Negatively Regulated by TFII-I and L4-33K

(2015) Jordan Wright et al.   JOURNAL OF VIROLOGY

Genetic Confirmation that the H5 Protein Is Required for Vaccinia Virus DNA Replication

(2015) Kathleen A. Boyle et al.   JOURNAL OF VIROLOGY

The SLX4 Complex Is a SUMO E3 Ligase that Impacts on Replication Stress Outcome and Genome Stability

(2015) Jean-Hugues Guervilly et al.   MOLECULAR CELL

The Replication Checkpoint Prevents Two Types of Fork Collapse without Regulating Replisome Stability

(2015) Huzefa Dungrawala et al.   MOLECULAR CELL

Cell-fate determination by ubiquitin-dependent regulation of translation

(2015) Achim Werner et al.   NATURE

Noncoding RNAs in eukaryotic ribosome biogenesis and function

(2015) Denis L J Lafontaine   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Genome-wide targeting of the epigenetic regulatory protein CTCF to gene promoters by the transcription factor TFII-I

(2015) Rodrigo Peña-Hernández et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeting CTCF to Control Virus Gene Expression: A Common Theme amongst Diverse DNA Viruses

(2015) Ieisha Pentland et al.   Viruses-Basel

PICH promotes sister chromatid disjunction and co-operates with topoisomerase II in mitosis

(2015) Christian F. Nielsen et al.   Nature Communications

Noncoding RNAs in eukaryotic ribosome biogenesis and function

(2015) Denis L J Lafontaine   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Selective Recruitment of Nuclear Factors to Productively Replicating Herpes Simplex Virus Genomes

(2015) Jill A. Dembowski et al.   PLoS Pathogens

Proteomic Analysis of Ubiquitin-Like Posttranslational Modifications Induced by the Adenovirus E4-ORF3 Protein

(2014) Sook-Young Sohn et al.   JOURNAL OF VIROLOGY

Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components

(2014) Constance Alabert et al.   NATURE CELL BIOLOGY

Treacher Collins syndrome TCOF1 protein cooperates with NBS1 in the DNA damage response

(2014) Alberto Ciccia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA

(2014) K. E. Sloan et al.   RNA

Viruses and the DNA Damage Response: Activation and Antagonism

(2014) Micah A. Luftig   Annual Review of Virology

Tracking Viral Genomes in Host Cells at Single-Molecule Resolution

(2013) I-Hsuan Wang et al.   Cell Host & Microbe

Roles of Chk1 in cell biology and cancer therapy

(2013) Youwei Zhang et al.   INTERNATIONAL JOURNAL OF CANCER

Identification of Proteins at Active, Stalled, and Collapsed Replication Forks Using Isolation of Proteins on Nascent DNA (iPOND) Coupled with Mass Spectrometry

(2013) Bianca M. Sirbu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA Virus Replication Compartments

(2013) M. Schmid et al.   JOURNAL OF VIROLOGY

Thiouracil Cross-Linking Mass Spectrometry: a Cell-Based Method To Identify Host Factors Involved in Viral Amplification

(2013) E. M. Lenarcic et al.   JOURNAL OF VIROLOGY

Fanconi anaemia and the repair of Watson and Crick DNA crosslinks

(2013) Molly C. Kottemann et al.   NATURE

Human genome-wide RNAi screen reveals a role for nuclear pore proteins in poxvirus morphogenesis

(2013) Gilad Sivan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Poxvirus DNA Replication

(2013) B. Moss   Cold Spring Harbor Perspectives in Biology

Adenovirus DNA Replication

(2013) R. C. Hoeben et al.   Cold Spring Harbor Perspectives in Biology

A Proteomic Characterization of Factors Enriched at Nascent DNA Molecules

(2013) Andres J. Lopez-Contreras et al.   Cell Reports

Adenovirus degradation of cellular proteins

(2012) Sabrina Schreiner et al.   Future Microbiology

DNA viruses and the cellular DNA-damage response

(2012) A. S. Turnell et al.   JOURNAL OF GENERAL VIROLOGY

Monitoring the spatiotemporal dynamics of proteins at replication forks and in assembled chromatin using isolation of proteins on nascent DNA

(2012) Bianca M Sirbu et al.   Nature Protocols

Herpes Simplex Viruses: Mechanisms of DNA Replication

(2012) S. K. Weller et al.   Cold Spring Harbor Perspectives in Biology

RNAi Screening Reveals Proteasome- and Cullin3-Dependent Stages in Vaccinia Virus Infection

(2012) Jason Mercer et al.   Cell Reports

A TACC3/ch-TOG/clathrin complex stabilises kinetochore fibres by inter-microtubule bridging

(2011) Daniel G Booth et al.   EMBO JOURNAL

Biochemistry and biology of the inducible multifunctional transcription factor TFII-I: 10years later

(2011) Ananda L. Roy   GENE

Analysis of protein dynamics at active, stalled, and collapsed replication forks

(2011) B. M. Sirbu et al.   GENES & DEVELOPMENT

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Spatiotemporally Different DNA Repair Systems Participate in Epstein-Barr Virus Genome Maturation

(2011) A. Sugimoto et al.   JOURNAL OF VIROLOGY

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Mutations of the SLX4 gene in Fanconi anemia

(2011) Yonghwan Kim et al.   NATURE GENETICS

Genomes in Conflict: Maintaining Genome Integrity During Virus Infection

(2010) Matthew D. Weitzman et al.   Annual Review of Microbiology

The Adenovirus E1b55K/E4orf6 Complex Induces Degradation of the Bloom Helicase during Infection

(2010) N. I. Orazio et al.   JOURNAL OF VIROLOGY

Treacle recruits RNA polymerase I complex to the nucleolus that is independent of UBF

(2009) Chen-I Lin et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Mammalian BTBD12/SLX4 Assembles A Holliday Junction Resolvase and Is Required for DNA Repair

(2009) Jennifer M. Svendsen et al.   CELL

Human SLX4 Is a Holliday Junction Resolvase Subunit that Binds Multiple DNA Repair/Recombination Endonucleases

(2009) Samira Fekairi et al.   CELL

Cellular DNA Ligase I Is Recruited to Cytoplasmic Vaccinia Virus Factories and Masks the Role of the Vaccinia Ligase in Viral DNA Replication

(2009) Nir Paran et al.   Cell Host & Microbe

Mislocalization of the MRN complex prevents ATR signaling during adenovirus infection

(2009) Christian T Carson et al.   EMBO JOURNAL

Vaccinia Virus Particles Mix Inefficiently, and in a Way That Would Restrict Viral Recombination, in Coinfected Cells

(2009) Y.-C. J. Lin et al.   JOURNAL OF VIROLOGY

Proteomics Analysis of the Nucleolus in Adenovirus-infected Cells

(2009) Yun W. Lam et al.   MOLECULAR & CELLULAR PROTEOMICS

Drosophila MUS312 and the Vertebrate Ortholog BTBD12 Interact with DNA Structure-Specific Endonucleases in DNA Repair and Recombination

(2009) Sabrina L. Andersen et al.   MOLECULAR CELL

Coordination of Structure-Specific Nucleases by Human SLX4/BTBD12 Is Required for DNA Repair

(2009) Ivan M. Muñoz et al.   MOLECULAR CELL

Caenorhabditis elegans HIM-18/SLX-4 Interacts with SLX-1 and XPF-1 and Maintains Genomic Integrity in the Germline by Processing Recombination Intermediates

(2009) Takamune T. Saito et al.   PLoS Genetics

Differential Requirements of the C Terminus of Nbs1 in Suppressing Adenovirus DNA Replication and Promoting Concatemer Formation

(2008) S. S. Lakdawala et al.   JOURNAL OF VIROLOGY

Vaccinia Virus DNA Ligase Recruits Cellular Topoisomerase II to Sites of Viral Replication and Assembly

(2008) Y.-C. J. Lin et al.   JOURNAL OF VIROLOGY

Distinct Requirements of Adenovirus E1b55K Protein for Degradation of Cellular Substrates

(2008) R. A. Schwartz et al.   JOURNAL OF VIROLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY