Aliphatic Hydrocarbon Enhances Phenanthrene Degradation by Autochthonous Prokaryotic Communities from a Pristine Seawater

BMPOS: a Flexible and User-Friendly Tool Sets for Microbiome Studies

(2016) Victor S. Pylro et al.   MICROBIAL ECOLOGY

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

High Diversity of Anaerobic Alkane-Degrading Microbial Communities in Marine Seep Sediments Based on (1-methylalkyl)succinate Synthase Genes

(2016) Marion H. Stagars et al.   Frontiers in Microbiology

Responses of microbial community from tropical pristine coastal soil to crude oil contamination

(2016) Daniel Morais et al.   PeerJ

Bacterial PAH degradation in marine and terrestrial habitats

(2015) Joaquim Vila et al.   CURRENT OPINION IN BIOTECHNOLOGY

Prospect, isolation, and characterization of microorganisms for potential use in cases of oil bioremediation along the coast of Trindade Island, Brazil

(2015) Edmo M. Rodrigues et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Bioremediation strategies of hydrocarbons and microbial diversity in the Trindade Island shoreline — Brazil

(2015) Edmo M. Rodrigues et al.   MARINE POLLUTION BULLETIN

Origin, distribution and toxicological potential of polycyclic aromatic hydrocarbons in surface sediments from the Bushehr coast, The Persian Gulf

(2015) Ali Mehdinia et al.   MARINE POLLUTION BULLETIN

Using dispersants after oil spills: impacts on the composition and activity of microbial communities

(2015) Sara Kleindienst et al.   NATURE REVIEWS MICROBIOLOGY

Data analysis for 16S microbial profiling from different benchtop sequencing platforms

(2014) Victor S. Pylro et al.   JOURNAL OF MICROBIOLOGICAL METHODS

DNA-based stable isotope probing coupled with cultivation methods implicates Methylophaga in hydrocarbon degradation

(2014) Sara Mishamandani et al.   Frontiers in Microbiology

Polycyclic Aromatic Hydrocarbon Degradation of Phytoplankton-Associated Arenibacter spp. and Description of Arenibacter algicola sp. nov., an Aromatic Hydrocarbon-Degrading Bacterium

(2013) Tony Gutierrez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Succession of Hydrocarbon-Degrading Bacteria in the Aftermath of the Deepwater Horizon Oil Spill in the Gulf of Mexico

(2013) Eric A. Dubinsky et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP

(2013) Tony Gutierrez et al.   ISME Journal

Brazilian Microbiome Project: Revealing the Unexplored Microbial Diversity—Challenges and Prospects

(2013) Victor Satler Pylro et al.   MICROBIAL ECOLOGY

Evaluating bacterial community structures in oil collected from the sea surface and sediment in the northern Gulf of Mexico after theDeepwater Horizonoil spill

(2013) Zhanfei Liu et al.   MicrobiologyOpen

Polycyclovorans algicola gen. nov., sp. nov., an Aromatic-Hydrocarbon-Degrading Marine Bacterium Found Associated with Laboratory Cultures of Marine Phytoplankton

(2012) Tony Gutierrez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation and characterization of bacteria associated with a syndrome disease of sea urchinStrongylocentrotus intermediusin North China

(2012) Yinan Wang et al.   AQUACULTURE RESEARCH

Enhanced rhamnolipids production by Pseudomonas aeruginosa based on a pH stage-controlled fed-batch fermentation process

(2012) Lingqing Zhu et al.   BIORESOURCE TECHNOLOGY

The weathering of oil after theDeepwater Horizonoil spill: insights from the chemical composition of the oil from the sea surface, salt marshes and sediments

(2012) Zhanfei Liu et al.   Environmental Research Letters

Alteromonas As a Key Agent of Polycyclic Aromatic Hydrocarbon Biodegradation in Crude Oil-Contaminated Coastal Sediment

(2012) Hyun Mi Jin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial Community Analysis of a Coastal Salt Marsh Affected by the Deepwater Horizon Oil Spill

(2012) Melanie J. Beazley et al.   PLoS One

Microbial Response to the MC-252 Oil and Corexit 9500 in the Gulf of Mexico

(2012) Romy Chakraborty et al.   Frontiers in Microbiology

Stable Isotope Probing of an Algal Bloom To Identify Uncultivated Members of the Rhodobacteraceae Associated with Low-Molecular-Weight Polycyclic Aromatic Hydrocarbon Degradation

(2011) Tony Gutierrez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hydrocarbon-Degrading Bacteria and the Bacterial Community Response in Gulf of Mexico Beach Sands Impacted by the Deepwater Horizon Oil Spill

(2011) Joel E. Kostka et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Multiple alkane hydroxylase systems in a marine alkane degrader, Alcanivorax dieselolei B-5

(2011) Chenli Liu et al.   ENVIRONMENTAL MICROBIOLOGY

Oil Biodegradation and Bioremediation: A Tale of the Two Worst Spills in U.S. History

(2011) Ronald M. Atlas et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Assessment of polyaromatic hydrocarbon degradation by potentially pathogenic environmental Vibrio parahaemolyticus isolates from coastal Louisiana, USA

(2011) Conor B. Smith et al.   MARINE POLLUTION BULLETIN

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill

(2011) M. C. Redmond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Isolation of hydrocarbon-degrading extremely halophilic archaea from an uncontaminated hypersaline pond (Camargue, France)

(2010) Yosmina H. Tapilatu et al.   EXTREMOPHILES

Microbial community structure of a heavy fuel oil-degrading marine consortium: linking microbial dynamics with polycyclic aromatic hydrocarbon utilization

(2010) Joaquim Vila et al.   FEMS MICROBIOLOGY ECOLOGY

Identification of Vibrio campbellii isolated from diseased farm-shrimps from south India and establishment of its pathogenic potential in an Artemia model

(2010) S. Haldar et al.   MICROBIOLOGY-SGM

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Biosurfactant production by Pseudomonas aeruginosa SP4 using sequencing batch reactors: Effect of oil-to-glucose ratio

(2009) Sira Pansiripat et al.   BIOCHEMICAL ENGINEERING JOURNAL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Biodegradation aspects of Polycyclic Aromatic Hydrocarbons (PAHs): A review

(2009) A.K. Haritash et al.   JOURNAL OF HAZARDOUS MATERIALS

Oceanobacter-related bacteria are important for the degradation of petroleum aliphatic hydrocarbons in the tropical marine environment

(2009) M. Teramoto et al.   MICROBIOLOGY-SGM

Biodiversity of polycyclic aromatic hydrocarbon-degrading bacteria from deep sea sediments of the Middle Atlantic Ridge

(2008) Zhisong Cui et al.   ENVIRONMENTAL MICROBIOLOGY