A Culture-Independent Approach to Enrich Endophytic Bacterial Cells from Sugarcane Stems for Community Characterization

Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis

(2016) Sagar M. Utturkar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unlocking the bacterial and fungal communities assemblages of sugarcane microbiome

(2016) Rafael Soares Correa de Souza et al.   Scientific Reports

Multiplex amplicon sequencing for microbe identification in community-based culture collections

(2016) Jaderson Silveira Leite Armanhi et al.   Scientific Reports

The core root microbiome of sugarcanes cultivated under varying nitrogen fertilizer application

(2015) Yun Kit Yeoh et al.   ENVIRONMENTAL MICROBIOLOGY

Impact of metagenomic DNA extraction procedures on the identifiable endophytic bacterial diversity in Sorghum bicolor (L. Moench)

(2015) Mapula Kgomotso Annah Maropola et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Blocking primers reduce co-amplification of plant DNA when studying bacterial endophyte communities

(2015) Brett E. Arenz et al.   JOURNAL OF MICROBIOLOGICAL METHODS

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability

(2015) Rebekah J. Robinson et al.   PLANT AND SOIL

High-throughput DNA barcoding for ecological network studies

(2015) Hirokazu Toju   POPULATION ECOLOGY

Optimization of isolation and cultivation of bacterial endophytes through addition of plant extract to nutrient media

(2015) N. Eevers et al.   Microbial Biotechnology

Isolation, characterization and plant growth promotion effects of putative bacterial endophytes associated with sweet sorghum (Sorghum bicolor (L) Moench)

(2014) Cintia Mareque et al.   ANNALS OF MICROBIOLOGY

The art of isolating nitrogen-fixing bacteria from non-leguminous plants using N-free semi-solid media: a practical guide for microbiologists

(2014) José Ivo Baldani et al.   PLANT AND SOIL

Analysis of plant microbe interactions in the era of next generation sequencing technologies

(2014) Claudia Knief   Frontiers in Plant Science

Identification and characterization of endophytic bacteria from corn (Zea mays L.) roots with biotechnological potential in agriculture

(2014) Vivian Jaskiw Szilagyi-Zecchin et al.   AMB Express

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic Approaches for Exploiting Uncultivated Bacteria as a Resource for Novel Biosynthetic Enzymology

(2013) Micheal C. Wilson et al.   CHEMISTRY & BIOLOGY

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities

(2013) Ramiro Logares et al.   ENVIRONMENTAL MICROBIOLOGY

Culture-independent analysis of endophytic bacterial communities associated with Brazilian sugarcane

(2013) G.S. Magnani et al.   GENETICS AND MOLECULAR RESEARCH

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

Effect of Sugarcane Burning or Green Harvest Methods on the Brazilian Cerrado Soil Bacterial Community Structure

(2013) Caio T. C. C. Rachid et al.   PLoS One

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EndophyticBradyrhizobiumspp. isolates from sugarcane obtained through different culture strategies

(2013) Luc Felicianus Marie Rouws et al.   Environmental Microbiology Reports

Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants

(2013) Birgit Mitter et al.   Frontiers in Plant Science

A new species ofBurkholderiaisolated from sugarcane roots promotes plant growth

(2013) Chanyarat Paungfoo-Lonhienne et al.   Microbial Biotechnology

Next-Generation Bio-Products Sowing the Seeds of Success for Sustainable Agriculture

(2013) Gabriele Berg et al.   Agronomy-Basel

Diversity and plant growth promoting evaluation abilities of bacteria isolated from sugarcane cultivated in the South of Brazil

(2012) Anelise Beneduzi et al.   APPLIED SOIL ECOLOGY

Unique and species-specific microbial communities in Oscarella lobularis and other Mediterranean Oscarella species (Porifera: Homoscleromorpha)

(2012) Volker Gloeckner et al.   MARINE BIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Living inside plants: bacterial endophytes

(2011) Barbara Reinhold-Hurek et al.   CURRENT OPINION IN PLANT BIOLOGY

Genetic and Phenotypic Diversity of Plant Growth Promoting Rhizobacteria Isolated from Sugarcane Plants Growing in Pakistan

(2011) Samina Mehnaz   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Functional Characteristics of an Endophyte Community Colonizing Rice Roots as Revealed by Metagenomic Analysis

(2011) A. Sessitsch et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Endophytic and rhizospheric enterobacteria isolated from sugar cane have different potentials for producing plant growth-promoting substances

(2011) Felipe Ibañez de Santi Ferrara et al.   PLANT AND SOIL

Molecular characterisation of the diazotrophic bacterial community in uninoculated and inoculated field-grown sugarcane (Saccharum sp.)

(2011) Doreen Fischer et al.   PLANT AND SOIL

The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community

(2011) Cecilia Taulé et al.   PLANT AND SOIL

Evidence from field nitrogen balance and 15N natural abundance data for the contribution of biological N2 fixation to Brazilian sugarcane varieties

(2011) Segundo Urquiaga et al.   PLANT AND SOIL

PredominantnifHtranscript phylotypes related toRhizobium rosettiformansin field-grown sugarcane plants and in Norway spruce

(2011) Claudia Sofía Burbano et al.   Environmental Microbiology Reports

Diversity of endophytic bacteria in Brazilian sugarcane

(2010) G.S. Magnani et al.   GENETICS AND MOLECULAR RESEARCH

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

(2010) Daniel K. Manter et al.   MICROBIAL ECOLOGY

Multiple displacement amplification compromises quantitative analysis of metagenomes

(2010) Suzan Yilmaz et al.   NATURE METHODS

Community- and Genome-Based Views of Plant-Associated Bacteria: Plant–Bacterial Interactions in Soybean and Rice

(2010) Seishi Ikeda et al.   PLANT AND CELL PHYSIOLOGY

Two seasons’ study on nifH gene expression and nitrogen fixation by diazotrophic endophytes in sugarcane (Saccharum spp. hybrids): expression of nifH genes similar to those of rhizobia

(2010) Nisarat Thaweenut et al.   PLANT AND SOIL

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic diversity and plant-growth related features of Burkholderia spp. from sugarcane roots

(2010) Danice M. Luvizotto et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Occurrence and diversity of nitrogen-fixingSphingomonasbacteria associated with rice plants grown in Brazil

(2009) Sandy Sampaio Videira et al.   FEMS MICROBIOLOGY LETTERS

Development of a Bacterial Cell Enrichment Method and its Application to the Community Analysis in Soybean Stems

(2009) Seishi Ikeda et al.   MICROBIAL ECOLOGY

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY

Bacterial endophytes: recent developments and applications

(2007) Robert P. Ryan et al.   FEMS MICROBIOLOGY LETTERS