Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence

Elucidation of the biosynthesis of the methane catalyst coenzyme F430

(2017) Simon J. Moore et al.   NATURE

A T-RFLP database for the rapid profiling of methanogenic communities in anaerobic digesters

(2016) Franziska Bühligen et al.   ANAEROBE

Species-sorting and mass-transfer paradigms control managed natural metacommunities

(2016) Susanne Günther et al.   ENVIRONMENTAL MICROBIOLOGY

The methanogenic redox cofactor F420 is widely synthesized by aerobic soil bacteria

(2016) Blair Ney et al.   ISME Journal

Physiology, Biochemistry, and Applications of F420- and Fo-Dependent Redox Reactions

(2016) Chris Greening et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Differentiating between live and dead Mycobacterium smegmatis using autofluorescence

(2016) Cynthia Wong et al.   TUBERCULOSIS

Online flow cytometry reveals microbial dynamics influenced by concurrent natural and operational events in groundwater used for drinking water treatment

(2016) Michael D. Besmer et al.   Scientific Reports

Development of droplet digital PCR assays for methanogenic taxa and examination of methanogen communities in full-scale anaerobic digesters

(2014) Tae Gwan Kim et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Dynamics in the microbial cytome—single cell analytics in natural systems

(2014) Christin Koch et al.   CURRENT OPINION IN BIOTECHNOLOGY

Dual investigation of methanogenic processes by quantitative PCR and quantitative microscopic fingerprinting

(2014) Yong Sung Kim et al.   FEMS MICROBIOLOGY LETTERS

Taxonomic database and cut-off value for processing mcrA gene 454 pyrosequencing data by MOTHUR

(2014) Sizhong Yang et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Consequence of a sudden wind event on the dynamics of a coastal phytoplankton community: an insight into specific population growth rates using a single cell high frequency approach

(2014) Mathilde Dugenne et al.   Frontiers in Microbiology

The feasibility of automated online flow cytometry for in-situ monitoring of microbial dynamics in aquatic ecosystems

(2014) Michael D. Besmer et al.   Frontiers in Microbiology

CHIC-an automated approach for the detection of dynamic variations in complex microbial communities

(2013) Christin Koch et al.   CYTOMETRY PART A

Cytometric fingerprinting for analyzing microbial intracommunity structure variation and identifying subcommunity function

(2013) Christin Koch et al.   Nature Protocols

Methyl coenzyme M reductase (mcrA) gene abundance correlates with activity measurements of methanogenic H2/CO2-enriched anaerobic biomass

(2013) Rachel Morris et al.   Microbial Biotechnology

Development and laboratory-scale testing of a fully automated online flow cytometer for drinking water analysis

(2012) Frederik Hammes et al.   CYTOMETRY PART A

Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces

(2012) B. Dridi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genome Sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a Methanogenic Archaeon from the Human Gut Belonging to a Seventh Order of Methanogens

(2012) G. Borrel et al.   JOURNAL OF BACTERIOLOGY

High resolution single cell analytics to follow microbial community dynamics in anaerobic ecosystems

(2012) Susann Müller et al.   METHODS

A metabolic quotient for methanogenic Archaea

(2012) B. Munk et al.   WATER SCIENCE AND TECHNOLOGY

Trace Elements Affect Methanogenic Activity and Diversity in Enrichments from Subsurface Coal Bed Produced Water

(2012) Burcu Ünal et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea

(2011) Takashi Narihiro et al.   Microbial Biotechnology

Polyphasic Analyses of Methanogenic Archaeal Communities in Agricultural Biogas Plants

(2010) E. Nettmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Population dynamics of methanogens during acidification of biogas fermenters fed with maize silage

(2010) Bernhard Munk et al.   ENGINEERING IN LIFE SCIENCES

mcrA-Targeted Real-Time Quantitative PCR Method To Examine Methanogen Communities

(2009) L. M. Steinberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogas production: current state and perspectives

(2009) Peter Weiland   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Long term fermentation studies about the nutritional requirements for biogasification of fodder beet silage as mono-substrate

(2009) P. Scherer et al.   BIOMASS & BIOENERGY

Phylogenetic Comparison of the Methanogenic Communities from an Acidic, Oligotrophic Fen and an Anaerobic Digester Treating Municipal Wastewater Sludge

(2008) L. M. Steinberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Archaea diversity within a commercial biogas plant utilizing herbal biomass determined by 16S rDNA andmcrA analysis

(2008) E. Nettmann et al.   JOURNAL OF APPLIED MICROBIOLOGY

The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology

(2008) Andreas Schlüter et al.   JOURNAL OF BIOTECHNOLOGY