Novel Concepts of MS-Cleavable Cross-linkers for Improved Peptide Structure Analysis

Structural analysis of small to medium-sized molecules by mass spectrometry after electron-ion fragmentation (ExD) reactions

(2016) Yulin Qi et al.   ANALYST

Divide and conquer: cleavable cross-linkers to study protein conformation and protein–protein interactions

(2016) Andrea Sinz   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Integrated Workflow for Structural Proteomics Studies Based on Cross-Linking/Mass Spectrometry with an MS/MS Cleavable Cross-Linker

(2016) Christian Arlt et al.   ANALYTICAL CHEMISTRY

Optimized Fragmentation Regime for Diazirine Photo-Cross-Linked Peptides

(2016) Sven H. Giese et al.   ANALYTICAL CHEMISTRY

Advances in protein complex analysis by chemical cross-linking coupled with mass spectrometry (CXMS) and bioinformatics

(2016) Bao Quoc Tran et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Dissociation Behavior of a TEMPO-Active Ester Cross-Linker for Peptide Structure Analysis by Free Radical Initiated Peptide Sequencing (FRIPS) in Negative ESI-MS

(2016) Christoph Hage et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Crosslinking and Mass Spectrometry: An Integrated Technology to Understand the Structure and Function of Molecular Machines

(2016) Alexander Leitner et al.   TRENDS IN BIOCHEMICAL SCIENCES

Dissociation behavior of a bifunctional tempo-active ester reagent for peptide structure analysis by free radical initiated peptide sequencing (FRIPS) mass spectrometry

(2015) Christian Ihling et al.   JOURNAL OF MASS SPECTROMETRY

Bromine isotopic signature facilitatesde novosequencing of peptides in free-radical-initiated peptide sequencing (FRIPS) mass spectrometry

(2015) Jungjoo Nam et al.   JOURNAL OF MASS SPECTROMETRY

Isotopically-coded short-range hetero-bifunctional photo-reactive crosslinkers for studying protein structure

(2015) Nicholas I. Brodie et al.   Journal of Proteomics

Protein structure prediction guided by crosslinking restraints – A systematic evaluation of the impact of the crosslinking spacer length

(2015) Tommy Hofmann et al.   METHODS

Performing protein crosslinking using gas-phase cleavable chemical crosslinkers and liquid chromatography-tandem mass spectrometry

(2015) Andrew S. Argo et al.   METHODS

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

(2015) Fan Liu et al.   NATURE METHODS

Design of CID-cleavable protein cross-linkers: identical mass modifications for simpler sequence analysis

(2015) Wynne V. Kandur et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Synthesis of two new enrichable and MS-cleavable cross-linkers to define protein–protein interactions by mass spectrometry

(2015) Anthony M. Burke et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Chemical cross-linking and native mass spectrometry: A fruitful combination for structural biology

(2015) Andrea Sinz et al.   PROTEIN SCIENCE

The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks

(2014) Andrea Sinz   Expert Review of Proteomics

Radical-driven peptide backbone dissociation tandem mass spectrometry

(2014) Han Bin Oh et al.   MASS SPECTROMETRY REVIEWS

A Newin VivoCross-linking Mass Spectrometry Platform to Define Protein–Protein Interactions in Living Cells

(2014) Robyn M. Kaake et al.   MOLECULAR & CELLULAR PROTEOMICS

Biomimetic Reagents for the Selective Free Radical and Acid–Base Chemistry of Glycans: Application to Glycan Structure Determination by Mass Spectrometry

(2013) Jinshan Gao et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Neutron-Encoded Protein Quantification by Peptide Carbamylation

(2013) Arne Ulbrich et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification

(2013) Michael J. Trnka et al.   MOLECULAR & CELLULAR PROTEOMICS

Cross-Link Guided Molecular Modeling with ROSETTA

(2013) Abdullah Kahraman et al.   PLoS One

Toward Full Peptide Sequence Coverage by Dual Fragmentation Combining Electron-Transfer and Higher-Energy Collision Dissociation Tandem Mass Spectrometry

(2012) Christian K. Frese et al.   ANALYTICAL CHEMISTRY

Mass Spectrometry-Based Structural Proteomics

(2012) Jason J. Serpa et al.   EUROPEAN JOURNAL OF MASS SPECTROMETRY

Fragmentation reactions of thiourea- and urea-compounds examined by tandem MS-, energy-resolved CID experiments, and theory

(2012) Francesco Falvo et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

The use of mass defect in modern mass spectrometry

(2012) Lekha Sleno   JOURNAL OF MASS SPECTROMETRY

Expanding the Chemical Cross-Linking Toolbox by the Use of Multiple Proteases and Enrichment by Size Exclusion Chromatography

(2012) Alexander Leitner et al.   MOLECULAR & CELLULAR PROTEOMICS

Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis

(2012) Romy Fritzsche et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Tandem mass spectrometric method for definitive localization of phosphorylation sites using bromine signature

(2011) Jong-Seo Kim et al.   ANALYTICAL BIOCHEMISTRY

C-terminal de novo sequencing of peptides using oxazolone-based derivatization with bromine signature

(2011) Jong-Seo Kim et al.   ANALYTICAL BIOCHEMISTRY

Identification of phosphorylated human peptides by accurate mass measurement alone

(2011) Yuan Mao et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

In Vivo Application of Photocleavable Protein Interaction Reporter Technology

(2011) Li Yang et al.   JOURNAL OF PROTEOME RESEARCH

CrossWork: Software-assisted identification of cross-linked peptides

(2011) Morten I. Rasmussen et al.   Journal of Proteomics

Simultaneous Identification of Tyrosine Phosphorylation and Sulfation Sites Utilizing Tyrosine-Specific Bromination

(2011) Jong-Seo Kim et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

(2010) Mathias Q. Müller et al.   ANALYTICAL CHEMISTRY

Use of a Combination of Isotopically Coded Cross-Linkers and Isotopically Coded N-Terminal Modification Reagents for Selective Identification of Inter-peptide Crosslinks

(2010) Evgeniy V. Petrotchenko et al.   ANALYTICAL CHEMISTRY

Preferential Cleavage of N−N Hydrazone Bonds for Sequencing Bis-arylhydrazone Conjugated Peptides by Electron Transfer Dissociation

(2010) Myles W. Gardner et al.   ANALYTICAL CHEMISTRY

Fragmentation behavior of a thiourea-based reagent for protein structure analysis by collision-induced dissociative chemical cross-linking

(2010) Mathias Q. Müller et al.   JOURNAL OF MASS SPECTROMETRY

Crosslinking combined with mass spectrometry for structural proteomics

(2010) Evgeniy V. Petrotchenko et al.   MASS SPECTROMETRY REVIEWS

Development of a Novel Cross-linking Strategy for Fast and Accurate Identification of Cross-linked Peptides of Protein Complexes

(2010) Athit Kao et al.   MOLECULAR & CELLULAR PROTEOMICS

Topographic Studies of the GroEL-GroES Chaperonin Complex by Chemical Cross-linking Using Diformyl Ethynylbenzene

(2010) Michael J. Trnka et al.   MOLECULAR & CELLULAR PROTEOMICS

Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking

(2010) Stefan Kalkhof et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A universal matrix-assisted laser desorption/ionization cleavable cross-linker for protein structure analysis

(2010) Mathias Q. Müller et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Gas-phase peptide sequencing by TEMPO-mediated radical generation

(2009) Minhee Lee et al.   ANALYST

Identification of Cross-Linked Peptides after Click-Based Enrichment Using Sequential Collision-Induced Dissociation and Electron Transfer Dissociation Tandem Mass Spectrometry

(2009) Saiful M. Chowdhury et al.   ANALYTICAL CHEMISTRY

Cyclophosphoramidate Ion as Mass Defect Marker for Efficient Detection of Protein Serine Phosphorylation

(2008) Yu Shi et al.   ANALYTICAL CHEMISTRY

Chromogenic Cross-Linker for the Characterization of Protein Structure by Infrared Multiphoton Dissociation Mass Spectrometry

(2008) Myles W. Gardner et al.   ANALYTICAL CHEMISTRY

Mass-Based Classification (MBC) of Peptides: Highly Accurate Precursor Ion Mass Values Can Be Used to Directly Recognize Peptide Phosphorylation

(2008) B SPENGLER et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Electron Capture/Transfer versus Collisionally Activated/Induced Dissociations: Solo or Duet?

(2008) Roman A. Zubarev et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

A model-based method for the prediction of the isotopic distribution of peptides

(2008) Dirk Valkenborg et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

BiPS, a Photocleavable, Isotopically Coded, Fluorescent Cross-linker for Structural Proteomics

(2008) Evgeniy V. Petrotchenko et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers

(2002) Nora S. Green et al.   PROTEIN SCIENCE