Whole-genome resequencing analyses of five pig breeds, including Korean wild and native, and three European origin breeds

Endometrial gene expression profiling in pregnant Meishan and Yorkshire pigs on day 12 of gestation

(2014) Ting Gu et al.   BMC GENOMICS

Twist 1 regulates the expression of PPARγ during hormone-induced 3T3-L1 preadipocyte differentiation: a possible role in obesity and associated diseases

(2014) Wanshan Ma et al.   Lipids in Health and Disease

Whole-Genome Analyses of Korean Native and Holstein Cattle Breeds by Massively Parallel Sequencing

(2014) Jung-Woo Choi et al.   PLoS One

Genetic associations for gilt growth, compositional, and structural soundness traits with sow longevity and lifetime reproductive performance1

(2013) M. T. Nikkilä et al.   JOURNAL OF ANIMAL SCIENCE

Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels

(2013) Jung-Woo Choi et al.   MOLECULES AND CELLS

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Uterine Gene Expression in the Live-Bearing Lizard, Chalcides ocellatus, Reveals Convergence of Squamate Reptile and Mammalian Pregnancy Mechanisms

(2012) Matthew C. Brandley et al.   Genome Biology and Evolution

Analyses of pig genomes provide insight into porcine demography and evolution

(2012) Martien A. M. Groenen et al.   NATURE

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Strong signatures of selection in the domestic pig genome

(2012) C.-J. Rubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift

(2012) Pablo Cingolani et al.   Frontiers in Genetics

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Twist1 in Human White Adipose Tissue and Obesity

(2010) Amanda T. Pettersson et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Whole-genome resequencing reveals loci under selection during chicken domestication

(2010) Carl-Johan Rubin et al.   NATURE

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genetic manipulation in pigs

(2009) David H Sachs et al.   Current Opinion in Organ Transplantation

Inferring weak population structure with the assistance of sample group information

(2009) MELISSA J. HUBISZ et al.   Molecular Ecology Resources