4.7 Article

Longitudinal three-dimensional visualisation of autoimmune diabetes by functional optical coherence imaging

Journal

DIABETOLOGIA
Volume 59, Issue 3, Pages 550-559

Publisher

SPRINGER
DOI: 10.1007/s00125-015-3819-x

Keywords

3D visualisation; Beta cell volume; Human islets; Inflammation; Label-free; Longitudinal; NOD mouse; Non-invasive; OCM; Quantification; Vasculature

Funding

  1. Swiss National Science Foundation [20320L-150191, 206021-139141]
  2. Commission for Technology and Innovation (CTI, Bern) [17537.2 PFLS-LS]
  3. Novo Nordisk Foundation
  4. Diabetesforbundet
  5. Barndiabetesforbundet
  6. Swedish Research Council
  7. Scientific Exchange Programme between Switzerland
  8. New Member States of the European Union
  9. project Enhancing Educational Potential of Nicolaus Copernicus University in the Disciplines of Mathematical and Natural Sciences
  10. Swiss National Science Foundation (SNF) [206021_139141] Funding Source: Swiss National Science Foundation (SNF)
  11. Novo Nordisk Foundation Section for Basic Stem Cell Biology [Grapin-Botton Group NNF] Funding Source: researchfish

Ask authors/readers for more resources

Aims/hypothesis It is generally accepted that structural and functional quantitative imaging of individual islets would be beneficial to elucidate the pathogenesis of type 1 diabetes. We here introduce functional optical coherence imaging (FOCI) for fast, label-free monitoring of beta cell destruction and associated alterations of islet vascularisation. Methods NOD mouse and human islets transplanted into the anterior chamber of the eye (ACE) were imaged with FOCI, in which the optical contrast of FOCI is based on intrinsic variations of the index of refraction resulting in a faster tomographic acquisition. In addition, the phase sensitivity allows simultaneous label-free acquisition of vascularisation. Results We demonstrate that FOCI allows longitudinal quantification of progressive autoimmune insulitis, including the three-dimensional quantification of beta cell volume, inflammation and vascularisation. The substantially increased back-scattering of islets is dominated by the insulin-zinc nanocrystals in the beta cell granules. This translates into a high specificity for the functional beta cell volume of islets. Applying FOCI to a spontaneous mouse model of type 1 diabetes, we quantify the modifications of the pancreatic microvasculature accompanying the progression of diabetes and reveal a strong correlation between increasing insulitis and density of the vascular network of the islet. Conclusions/interpretation FOCI provides a novel imaging technique for investigating functional and structural diabetes-induced alterations of the islets. The label-free detection of beta cell volume and infiltration together with vascularisation offers a unique extension to study ACE-transplanted human islets. These results are contributing to a deeper understanding of human islet transplant rejection and label-free in vivo monitoring of drug efficacy.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Cell Biology

Epithelial morphogenesis in organoids

Byung Ho Lee, Irene Seijo-Barandiaran, Anne Grapin-Botton

Summary: Epithelial organoids can mimic morphogenetic processes in vivo, such as lumen and multilayer formation, folding, branching, delamination, and elongation. This article elaborates on the signaling molecules controlling morphogenesis, including their emergence as signaling centers in the organoids. It also discusses how mechanical cues and environmental material properties influence organoid shape.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2022)

Article Optics

Distributed temperature sensor combining centimeter resolution with hundreds of meters sensing range

Julien Gasser, Daryl Warpelin, Felix Bussieres, Jerome Extermann, Enrico Pomarico

Summary: We present a Raman distributed temperature sensor based on standard telecom single mode fibers and efficient polarization-independent superconducting nanowire single photon detectors. The sensor achieves a resolution of 3 cm and 1.5 degrees C on a 5 m fiber, and the temperature resolution is affected by the drop in laser repetition rate for long fibers. With 3 minutes integration on a 500 m fiber, a trade-off of 10 cm and 8 degrees C resolution is achieved.

OPTICS EXPRESS (2022)

Editorial Material Cell & Tissue Engineering

Stem cell-derived β cells go in monkeys

Anne Grapin-Botton, Barbara Ludwig

Summary: Du et al. conducted the first transplantation of 0 cells derived from pluripotent stem cells in diabetic monkeys, as a step towards clinical translation. They observed gradual benefits over months, but also noted immune rejection of the grafts at 5-6 months.

CELL STEM CELL (2022)

Article Optics

Artifacts in optical projection tomography due to refractive-index mismatch: model and correction

Yan Liu, Jonathan Dong, Cedric Schmidt, Aleix Boquet-Pujadas, Jerome Extermann, Michael Unser

Summary: Optical projection tomography (OPT) is a powerful tool for 3D imaging of mesoscopic samples. This study focuses on addressing the issue of refractive-index mismatch and proposes a fast and efficient reconstruction method to correct the induced artifacts.

OPTICS LETTERS (2022)

Review Cell Biology

Mapping and exploring the organoid state space using synthetic biology

Tzer Han Tan, Jifeng Liu, Anne Grapin-Botton

Summary: The functional relevance of an organoid depends on its differentiation, morphology, cell arrangement, and biophysical properties, which collectively define its state. Transcriptomics and high-content image analysis are the most effective methods for characterizing the state variables of an organoid or the cells that compose it, and comparing them to their in vivo counterparts. Organoids explore a wider state space than in vivo organs due to the lack of niche signaling and the variability of boundary conditions in vitro. By using data-driven state inference and in silico modeling, phase diagrams can be constructed to systematically sort organoids based on biochemical or biophysical axes, providing strategies for modulating their state by manipulating the biochemical and biophysical environment and the cells used for seeding.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2023)

Article Multidisciplinary Sciences

Statistical distortion of supervised learning predictions in optical microscopy induced by image compression

Enrico Pomarico, Cedric Schmidt, Florian Chays, David Nguyen, Arielle Planchette, Audrey Tissot, Adrien Roux, Stephane Pages, Laura Batti, Christoph Clausen, Theo Lasser, Aleksandra Radenovic, Bruno Sanguinetti, Jerome Extermann

Summary: The extensive use of supervised learning models on compressed datasets has become possible due to the growth of data throughput in optical microscopy. This study quantifies the statistical distortions induced by compression and compares them to the raw predictive uncertainty. The results show that image compression can significantly alter predictions and that higher compression ratios lead to larger distortions.

SCIENTIFIC REPORTS (2022)

Article Cell & Tissue Engineering

Long-term feeder-free culture of human pancreatic progenitors on fibronectin or matrix-free polymer potentiates 13 cell differentiation

Akiko Nakamura, Yan Fung Wong, Andrea Venturato, Magali Michaut, Seshasailam Venkateswaran, Mithun Santra, Carla Goncalves, Michael Larsen, Marit Leuschner, Yung Hae Kim, Joshua Brickman, Mark Bradley, Anne Grapin-Botton

Summary: In this study, a protocol for long-term expansion of human pancreatic progenitors in a defined medium was developed, and a polymer that can replace fibronectin was identified. The expanded progenitors showed more efficient differentiation into glucose-responsive 13 cells and produced fewer glucagon-expressing cells compared to directly differentiated progenitors. This method provides flexibility in research and therapeutic production by allowing the expansion and cryopreservation of progenitors under defined conditions.

STEM CELL REPORTS (2022)

Review Cell Biology

Organoid Imaging: Seeing Development and Function

Rashmiparvathi Keshara, Yung Hae Kim, Anne Grapin-Botton

Summary: Organoids are simplified and miniaturized versions of organs produced in vitro from stem or progenitor cells. They are useful for studying development, homeostasis, regeneration, and disease. Imaging methods play a pivotal role in visualizing and understanding organoids' self-organization, growth, differentiation, and function.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2022)

Review Developmental Biology

Pancreas organoid models of development and regeneration

Anne Grapin-Botton, Yung Hae Kim

Summary: Organoids have become a rapidly advancing and widely used model in biological and medical research. This review focuses on the development of pancreas organoids in vitro, covering methods from embryonic, fetal, adult cells, to pluripotent stem cells. The review discusses how these systems have enhanced our understanding of pancreas development, regeneration, and diseases, as well as their limitations and potential for future discoveries.

DEVELOPMENT (2022)

Review Endocrinology & Metabolism

Towards a better understanding of diabetes mellitus using organoid models

Belin Selcen Beydag-Tasoez, Siham Yennek, Anne Grapin-Botton

Summary: This Review assesses the progress in developing pancreatic organoids and bioengineered systems for modeling diabetes mellitus and its complications. The merger between the organoid and bioengineering fields will provide integrative models for studying the multi-organ disease.

NATURE REVIEWS ENDOCRINOLOGY (2023)

Article Neurosciences

Opening the black box of traumatic brain injury: a holistic approach combining human 3D neural tissue and an in vitro traumatic brain injury induction device

Celine Loussert-Fonta, Luc Stoppini, Yoan Neuenschwander, Ophelie Righini, Denis Prim, Cedric Schmidt, Marc O. Heuschkel, Loris Gomez Baisac, Milica Jovic, Marc E. Pfeifer, Jerome Extermann, Adrien Roux

Summary: Traumatic brain injury (TBI) is a complex condition with a wide range of pathophysiological changes. Animal models have been used to study the relationship between mechanical damage and neural cell functions, but they have limitations in reproducing human brain trauma. Researchers have therefore developed an in vitro platform using human iPS cells to induce brain injuries, allowing for better understanding of the biological mechanisms involved. By measuring electrophysiological activities, quantifying biomarker release, and using imaging methods, researchers have observed significant changes in tissue function and cell death resulting from TBI.

FRONTIERS IN NEUROSCIENCE (2023)

Article Biology

Optical imaging of the small intestine immune compartment across scales

Arielle Louise Planchette, Cedric Schmidt, Olivier Burri, Mercedes Gomez de Agueero, Aleksandra Radenovic, Alessio Mylonas, Jerome Extermann

Summary: Optical projection tomography (OPT) enables the observation and understanding of tissue-wide networks in three dimensions. A multi-modal workflow for characterizing the mouse small intestine is presented, demonstrating its applicability for imaging the intestinal immune compartment and mucosal structures.

COMMUNICATIONS BIOLOGY (2023)

Article Cell Biology

Integrating single-cell imaging and RNA sequencing datasets links differentiation and morphogenetic dynamics of human pancreatic endocrine progenitors

Belin Selcen Beydag-Tasoez, Joyson Verner D'Costa, Lena Hersemann, Byung Ho Lee, Federica Luppino, Yung Hae Kim, Christoph Zechner, Anne Grapin-Botton

Summary: This study investigates the dynamics of NEUROG3 gene expression in human pancreatic development. The researchers find that human NEUROG3 expression is approximately 2-fold slower than that of mice. They also observe heterogeneous peak levels of NEUROG3 expression and demonstrate that both low and high peak levels can trigger the differentiation of cells into hormone-expressing cells. By integrating single-cell transcriptome data with live cell imaging, they propose a data-mapping methodology applicable to other contexts and identify a role for KLK12 in motility at the onset of NEUROG3 expression.

DEVELOPMENTAL CELL (2023)

Review Biochemistry & Molecular Biology

Emerging principles of primary cilia dynamics in controlling tissue organization and function

Jay Gopalakrishnan, Kerstin Feistel, Benjamin M. Friedrich, Anne Grapin-Botton, Nathalie Jurisch-Yaksi, Elvira Mass, David U. Mick, Roman-Ulrich Mueller, Helen May-Simera, Bernhard Schermer, Miriam Schmidts, Peter Walentek, Dagmar Wachten

Summary: Primary cilia are dynamic cellular protrusions that play a crucial role in sensing and processing extracellular signals, controlling cell fate, and function during tissue development.

EMBO JOURNAL (2023)

Article Cell & Tissue Engineering

Improved Differentiation of hESC-Derived Pancreatic Progenitors by Using Human Fetal Pancreatic Mesenchymal Cells in a Micro-scalable Three-Dimensional Co-culture System

Zahra Ghezelayagh, Mahsa Zabihi, Ibrahim Zarkesh, Carla A. C. Goncalves, Michael Larsen, Newsha Hagh-parast, Mohammad Pakzad, Massoud Vosough, Babak Arjmand, Hossein Baharvand, Bagher Larijani, Anne Grapin-Botton, Hamid Reza Aghayan, Yaser Tahamtani

Summary: In this study, the impact of co-culturing human embryonic stem cell-derived pancreatic progenitors with human fetal pancreatic-derived mesenchymal cells on endocrine and beta cell development was evaluated. It was found that pancreatic mesenchyme had an inductive effect on pancreatic progenitors, promoting beta cell maturation. Additionally, scalable cultures combining these cells were investigated for their potential applications in mimicking pancreatic tissue for developmental studies.

STEM CELL REVIEWS AND REPORTS (2022)

No Data Available