Transcriptomes of lineage-specificDrosophilaneuroblasts profiled by genetic targeting and robotic sorting

Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

(2015) A. Zeisel et al.   SCIENCE

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Making Drosophila lineage–restricted drivers via patterned recombination in neuroblasts

(2014) Takeshi Awasaki et al.   NATURE NEUROSCIENCE

A Regulatory Transcriptional Loop Controls Proliferation and Differentiation in Drosophila Neural Stem Cells

(2014) Tetsuo Yasugi et al.   PLoS One

Genetic transformation of structural and functional circuitry rewires the Drosophila brain

(2014) Sonia Sen et al.   eLife

The Drosophila Sp8 transcription factor Buttonhead prevents premature differentiation of intermediate neural progenitors

(2014) Yonggang Xie et al.   eLife

Trithorax maintains the functional heterogeneity of neural stem cells through the transcription factor Buttonhead

(2014) Hideyuki Komori et al.   eLife

Transient nuclear Prospero induces neural progenitor quiescence

(2014) Sen-Lin Lai et al.   eLife

voom: precision weights unlock linear model analysis tools for RNA-seq read counts

(2014) Charity W Law et al.   GENOME BIOLOGY

Extremes of Lineage Plasticity in the Drosophila Brain

(2013) Suewei Lin et al.   CURRENT BIOLOGY

Clonal Development and Organization of the Adult Drosophila Central Brain

(2013) Hung-Hsiang Yu et al.   CURRENT BIOLOGY

Drosophila intermediate neural progenitors produce lineage-dependent related series of diverse neurons

(2013) Y.-C. Wang et al.   DEVELOPMENT

Temporal patterning of Drosophila medulla neuroblasts controls neural fates

(2013) Xin Li et al.   NATURE

Molecular logic of neocortical projection neuron specification, development and diversity

(2013) Luciano Custo Greig et al.   NATURE REVIEWS NEUROSCIENCE

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Drosophila neuroblasts: a model for stem cell biology

(2012) C. C. F. Homem et al.   DEVELOPMENT

The Snail Family Member Worniu Is Continuously Required in Neuroblasts to Prevent Elav-Induced Premature Differentiation

(2012) Sen-Lin Lai et al.   DEVELOPMENTAL CELL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

(2012) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

The bHLH Repressor Deadpan Regulates the Self-renewal and Specification of Drosophila Larval Neural Stem Cells Independently of Notch

(2012) Sijun Zhu et al.   PLoS One

A GAL4-Driver Line Resource for Drosophila Neurobiology

(2012) Arnim Jenett et al.   Cell Reports

FACS Purification and Transcriptome Analysis of Drosophila Neural Stem Cells Reveals a Role for Klumpfuss in Self-Renewal

(2012) Christian Berger et al.   Cell Reports

Lineage Analysis of Drosophila Lateral Antennal Lobe Neurons Reveals Notch-Dependent Binary Temporal Fate Decisions

(2012) Suewei Lin et al.   PLOS BIOLOGY

Cell Type-Specific Transcriptomics in the Brain

(2011) B. W. Okaty et al.   JOURNAL OF NEUROSCIENCE

Ets transcription factor Pointed promotes the generation of intermediate neural progenitors in Drosophila larval brains

(2011) S. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Refinement of Tools for Targeted Gene Expression in Drosophila

(2010) B. D. Pfeiffer et al.   GENETICS

Drosophila type II neuroblast lineages keep Prospero levels low to generate large clones that contribute to the adult brain central complex

(2010) Omer Bayraktar et al.   Neural Development

A Complete Developmental Sequence of a Drosophila Neuronal Lineage as Revealed by Twin-Spot MARCM

(2010) Hung-Hsiang Yu et al.   PLOS BIOLOGY

QuickGO: a web-based tool for Gene Ontology searching

(2009) D. Binns et al.   BIOINFORMATICS

Lineage-specific effects of Notch/Numb signaling in post-embryonic development of the Drosophila brain

(2009) S. Lin et al.   DEVELOPMENT

Dissecting differential gene expression within the circadian neuronal circuit of Drosophila

(2009) Emi Nagoshi et al.   NATURE NEUROSCIENCE

Twin-spot MARCM to reveal the developmental origin and identity of neurons

(2009) Hung-Hsiang Yu et al.   NATURE NEUROSCIENCE

Temporal Transcription Factors and Their Targets Schedule the End of Neural Proliferation in Drosophila

(2008) Cédric Maurange et al.   CELL

Clonal analysis of Drosophila antennal lobe neurons: diverse neuronal architectures in the lateral neuroblast lineage

(2008) S.-L. Lai et al.   DEVELOPMENT

empty spiracles is required for the development of olfactory projection neuron circuitry in Drosophila

(2008) R. Lichtneckert et al.   DEVELOPMENT

A conserved nuclear receptor, Tailless, is required for efficient proliferation and prolonged maintenance of mushroom body progenitors in the Drosophila brain

(2008) Mitsuhiko Kurusu et al.   DEVELOPMENTAL BIOLOGY

The Tumor Suppressors Brat and Numb Regulate Transit-Amplifying Neuroblast Lineages in Drosophila

(2008) Sarah K. Bowman et al.   DEVELOPMENTAL CELL

Identification ofDrosophilatype II neuroblast lineages containing transit amplifying ganglion mother cells

(2008) Jason Q. Boone et al.   Developmental Neurobiology

Amplification of neural stem cell proliferation by intermediate progenitor cells in Drosophila brain development

(2008) Bruno C Bello et al.   Neural Development