Soil microbiota respond to green manure in organic vineyards

Cover crops support ecological intensification of arable cropping systems

(2017) Raphaël A. Wittwer et al.   Scientific Reports

Effects of biochar and compost amendments on soil physico-chemical properties and the total community within a temperate agricultural soil

(2016) Ibrahim S. Abujabhah et al.   APPLIED SOIL ECOLOGY

Antifungal-activity-producing lactic acid bacteria as biocontrol agents in plants

(2016) Milind H. Gajbhiye et al.   BIOCONTROL SCIENCE AND TECHNOLOGY

Multi-organ screening of efficient bacterial control agents against two major pathogens of grapevine

(2016) R. Haidar et al.   BIOLOGICAL CONTROL

Thermophilic molds: Biology and applications

(2016) Bijender Singh et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Myrmecridium hiemale sp. nov. from snow-covered alpine soil is the first eurypsychrophile in this genus of anamorphic fungi

(2016) Ursula Peintner et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Evaluation of the oenological suitability of grapes grown using biodynamic agriculture: the case of a bad vintage

(2016) R. Guzzon et al.   JOURNAL OF APPLIED MICROBIOLOGY

Current knowledge and perspectives of Paenibacillus: a review

(2016) Elliot Nicholas Grady et al.   Microbial Cell Factories

Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by vineyard management

(2016) Kayla N. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

A comparison of soil quality and yield parameters under organic and conventional vineyard systems in Mediterranean conditions (West Turkey)

(2015) N. Okur et al.   BIOLOGICAL AGRICULTURE & HORTICULTURE

FlowClus: efficiently filtering and denoising pyrosequenced amplicons

(2015) John M Gaspar et al.   BMC BIOINFORMATICS

Microbial inoculants for the biocontrol of Fusarium spp. in durum wheat

(2015) Loredana Baffoni et al.   BMC MICROBIOLOGY

Actinoplanes bogoriensis sp. nov., a novel actinomycete isolated from leaf litter

(2015) Arif Nurkanto et al.   JOURNAL OF ANTIBIOTICS

metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

(2015) Johan Bengtsson-Palme et al.   Molecular Ecology Resources

Species diversity of Cladorrhinum in Argentina and description of a new species, Cladorrhinum australe

(2015) C. C. Carmarán et al.   MYCOLOGICAL PROGRESS

Rhizosphere bacteria and fungi associated with plant growth in soils of three replanted apple orchards

(2015) Ingrid H. Franke-Whittle et al.   PLANT AND SOIL

Growth, Yield and Fruit Quality of Grapevines under Organic and Biodynamic Management

(2015) Johanna Döring et al.   PLoS One

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genusNitrospira

(2015) Hanna Koch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of 44 years of chronic nitrogen fertilization on the soil nitrifying community of permanent grassland

(2015) Xue Zhou et al.   SOIL BIOLOGY & BIOCHEMISTRY

Genetic and Technological Characterisation of Vineyard- and Winery-Associated Lactic Acid Bacteria

(2015) Aspasia A. Nisiotou et al.   Biomed Research International

Evaluating the potential of buckwheat and cahaba vetch as nectar producing cover crops for enhancing biological control of Homalodisca vitripennis in California vineyards

(2014) Nicola A. Irvin et al.   BIOLOGICAL CONTROL

Black Yeasts and Their Filamentous Relatives: Principles of Pathogenesis and Host Defense

(2014) S. Seyedmousavi et al.   CLINICAL MICROBIOLOGY REVIEWS

Pontibacter humi sp. nov., Isolated from Mountain Soil

(2014) Sathiyaraj Srinivasan et al.   CURRENT MICROBIOLOGY

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Pontibacter diazotrophicus sp. nov., a Novel Nitrogen-Fixing Bacterium of the Family Cytophagaceae

(2014) Linghua Xu et al.   PLoS One

Much beyond Mantel: Bringing Procrustes Association Metric to the Plant and Soil Ecologist’s Toolbox

(2014) Francy Junio Gonçalves Lisboa et al.   PLoS One

Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557T

(2014) Wayne Reeve et al.   Standards in Genomic Sciences

Microbial community structure in vineyard soils across altitudinal gradients and in different seasons

(2013) Paola E. Corneo et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative life cycle assessment in the wine sector: biodynamic vs. conventional viticulture activities in NW Spain

(2013) Pedro Villanueva-Rey et al.   JOURNAL OF CLEANER PRODUCTION

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Unravelling Soil Fungal Communities from Different Mediterranean Land-Use Backgrounds

(2012) Alberto Orgiazzi et al.   PLoS One

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Microvirga lupini sp. nov., Microvirga lotononidis sp. nov. and Microvirga zambiensis sp. nov. are alphaproteobacterial root-nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts

(2011) J. K. Ardley et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Taxonomic and ecological studies of actinomycetes from Vietnam: isolation and genus-level diversity

(2011) Duong Van Hop et al.   JOURNAL OF ANTIBIOTICS

Long-term impacts of de-oiled two-phase olive mill waste on soil chemical properties, enzyme activities and productivity in an olive grove

(2011) A. López-Piñeiro et al.   SOIL & TILLAGE RESEARCH

Performance of three endophytic actinomycetes in relation to plant growth promotion and biological control of Pythium aphanidermatum, a pathogen of cucumber under commercial field production conditions in the United Arab Emirates

(2010) Khaled A. El-Tarabily et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

DNA barcoding of arbuscular mycorrhizal fungi

(2010) Herbert Stockinger et al.   NEW PHYTOLOGIST

Pyrosequencing Assessment of Soil Microbial Communities in Organic and Conventional Potato Farms

(2010) Akifumi Sugiyama et al.   PLANT DISEASE

Various players in the nitrogen cycle: Diversity and functions of the microorganisms involved in nitrification and denitrification

(2010) Masahito Hayatsu et al.   SOIL SCIENCE AND PLANT NUTRITION

Compost can successfully replace mineral fertilizers in the nutrient management of commercial peach orchard

(2010) E. Baldi et al.   SOIL USE AND MANAGEMENT

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Contamination of vineyard soils with fungicides: A review of environmental and toxicological aspects

(2009) Michael Komárek et al.   ENVIRONMENT INTERNATIONAL

Cystofilobasidium lacus-mascardii sp. nov., a basidiomycetous yeast species isolated from aquatic environments of the Patagonian Andes, and Cystofilobasidium macerans sp. nov., the sexual stage of Cryptococcus macerans

(2009) D. Libkind et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The diversity of arbuscular mycorrhizal fungi amplified from grapevine roots (Vitis vinifera L.) in Oregon vineyards is seasonally stable and influenced by soil and vine age

(2009) R. Paul Schreiner et al.   MYCOLOGIA

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

Soil morphology, depth and grapevine root frequency influence microbial communities in a Pinot noir vineyard

(2007) K.L. Steenwerth et al.   SOIL BIOLOGY & BIOCHEMISTRY