Host effects on microbiota community assembly

Dynamic microbiome evolution in social bees

(2017) Waldan K. Kwong et al.   Science Advances

Host Selection of Microbiota via Differential Adhesion

(2016) Kirstie McLoughlin et al.   Cell Host & Microbe

Flowers and Wild Megachilid Bees Share Microbes

(2016) Quinn S. McFrederick et al.   MICROBIAL ECOLOGY

Immune response and gut microbial community structure in bumblebees after microbiota transplants

(2016) Kathrin Näpflin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Deterministic Assembly of Complex Bacterial Communities in Guts of Germ-Free Cockroaches

(2015) Aram Mikaelyan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Deep Sequencing and Ecological Characterization of Gut Microbial Communities of Diverse Bumble Bee Species

(2015) Haw Chuan Lim et al.   PLoS One

Routes of Acquisition of the Gut Microbiota of the Honey Bee Apis mellifera

(2014) J. Elijah Powell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacteria from Diverse Habitats Colonize and Compete in the Mouse Gut

(2014) Henning Seedorf et al.   CELL

Variation in gut microbial communities and its association with pathogen infection in wild bumble bees (Bombus)

(2014) Daniel P Cariveau et al.   ISME Journal

Standard methods for research on Apis mellifera gut symbionts

(2013) Philipp Engel et al.   JOURNAL OF APICULTURAL RESEARCH

Diversity and evolutionary patterns of bacterial gut associates of corbiculate bees

(2013) Hauke Koch et al.   MOLECULAR ECOLOGY

Stability and phylogenetic correlation in gut microbiota: lessons from ants and apes

(2013) Jon G. Sanders et al.   MOLECULAR ECOLOGY

Control of pathogens and pathobionts by the gut microbiota

(2013) Nobuhiko Kamada et al.   NATURE IMMUNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Practical innovations for high-throughput amplicon sequencing

(2013) Derek S Lundberg et al.   NATURE METHODS

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Distinct antimicrobial peptide expression determines host species-specific bacterial associations

(2013) S. Franzenburg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Establishment of Characteristic Gut Bacteria during Development of the Honeybee Worker

(2012) Vincent G. Martinson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

BactQuant: An enhanced broad-coverage bacterial quantitative real-time PCR assay

(2012) Cindy M Liu et al.   BMC MICROBIOLOGY

Gut microbiota instead of host genotype drive the specificity in the interaction of a natural host-parasite system

(2012) Hauke Koch et al.   ECOLOGY LETTERS

Environment or kin: whence do bees obtain acidophilic bacteria?

(2012) QUINN S. McFREDERICK et al.   MOLECULAR ECOLOGY

Do diet and taxonomy influence insect gut bacterial communities?

(2012) D. R. Colman et al.   MOLECULAR ECOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

(2012) E. K. Costello et al.   SCIENCE

Interactions Between the Microbiota and the Immune System

(2012) L. V. Hooper et al.   SCIENCE

Linking metacommunity theory and symbiont evolutionary ecology

(2012) Joseph R. Mihaljevic   TRENDS IN ECOLOGY & EVOLUTION

Ecological assembly rules in plant communities-approaches, patterns and prospects

(2011) Lars Götzenberger et al.   BIOLOGICAL REVIEWS

THE ROLES OF HOST EVOLUTIONARY RELATIONSHIPS (GENUS: NASONIA) AND DEVELOPMENT IN STRUCTURING MICROBIAL COMMUNITIES

(2011) Robert M. Brucker et al.   EVOLUTION

Bacterial Communities in Central European Bumblebees: Low Diversity and High Specificity

(2011) Hauke Koch et al.   MICROBIAL ECOLOGY

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Socially transmitted gut microbiota protect bumble bees against an intestinal parasite

(2011) H. Koch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Communities of Diverse Drosophila Species: Ecological Context of a Host–Microbe Model System

(2011) James Angus Chandler et al.   PLoS Genetics

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Strain filtering and transmission of a mixed infection in a social insect

(2010) Y. ULRICH et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

From Structure to Function: the Ecology of Host-Associated Microbial Communities

(2010) C. J. Robinson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

A simple and distinctive microbiota associated with honey bees and bumble bees

(2010) VINCENT G. MARTINSON et al.   MOLECULAR ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Regulation of Midgut Growth, Development, and Metamorphosis

(2009) Raziel S. Hakim et al.   Annual Review of Entomology

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL