Bacterial transcriptome remodeling during sequential co-culture with a marine dinoflagellate and diatom

Feeding on compatible solutes: A substrate-induced pathway for uptake and catabolism of ectoines and its genetic control by EnuR

(2016) Annina Schulz et al.   ENVIRONMENTAL MICROBIOLOGY

Evidence for quorum sensing and differential metabolite production by a marine bacterium in response to DMSP

(2016) Winifred M Johnson et al.   ISME Journal

Torn apart and reunited: impact of a heterotroph on the transcriptome of Prochlorococcus

(2016) Steven J Biller et al.   ISME Journal

Deciphering ocean carbon in a changing world

(2016) Mary Ann Moran et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chemotaxis toward phytoplankton drives organic matter partitioning among marine bacteria

(2016) Steven Smriga et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic metabolic exchange governs a marine algal-bacterial interaction

(2016) Einat Segev et al.   eLife

A Bacterial Quorum-Sensing Precursor Induces Mortality in the Marine Coccolithophore, Emiliania huxleyi

(2016) Elizabeth L. Harvey et al.   Frontiers in Microbiology

Pronounced daily succession of phytoplankton, archaea and bacteria following a spring bloom

(2016) David M. Needham et al.   Nature Microbiology

Single-taxon field measurements of bacterial gene regulation controlling DMSP fate

(2015) Vanessa A Varaljay et al.   ISME Journal

Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria

(2015) S. A. Amin et al.   NATURE

An Updated genome annotation for the model marine bacterium Ruegeria pomeroyi DSS-3

(2015) Adam R Rivers et al.   Standards in Genomic Sciences

Carbohydrate Catabolism in Phaeobacter inhibens DSM 17395, a Member of the Marine Roseobacter Clade

(2014) Katharina Wiegmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimethylamine and trimethylamine N-oxide are supplementary energy sources for a marine heterotrophic bacterium: implications for marine carbon and nitrogen cycling

(2014) Ian DEA Lidbury et al.   ISME Journal

Evolutionary Ecology of the Marine Roseobacter Clade

(2014) Haiwei Luo et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Cryptic carbon and sulfur cycling between surface ocean plankton

(2014) Bryndan P. Durham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Closely related phytoplankton species produce similar suites of dissolved organic matter

(2014) Jamie W. Becker et al.   Frontiers in Microbiology

Boundary influences on HAB phytoplankton ecology in a stratification-enhanced upwelling shadow

(2013) J.P. Ryan et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Host-specific adaptation governs the interaction of the marine diatom, Pseudo-nitzschia and their microbiota

(2013) Marilou P Sison-Mangus et al.   ISME Journal

The CckA-ChpT-CtrA Phosphorelay System Is Regulated by Quorum Sensing and Controls Flagellar Motility in the Marine Sponge Symbiont Ruegeria sp. KLH11

(2013) Jindong Zan et al.   PLoS One

Regulatory systems controlling motility and gene transfer agent production and release in Rhodobacter capsulatus

(2012) Ryan G. Mercer et al.   FEMS MICROBIOLOGY LETTERS

Interactions between Diatoms and Bacteria

(2012) S. A. Amin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The Ruegeria pomeroyi acuI Gene Has a Role in DMSP Catabolism and Resembles yhdH of E. coli and Other Bacteria in Conferring Resistance to Acrylate

(2012) Jonathan D. Todd et al.   PLoS One

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Recalcitrant Dissolved Organic Carbon Fractions

(2011) Dennis A. Hansell   Annual Review of Marine Science

Effects of micro-algae commonly used in aquaculture on acyl-homoserine lactone quorum sensing

(2011) F.M.I. Natrah et al.   AQUACULTURE

DddW, a third DMSP lyase in a model Roseobacter marine bacterium, Ruegeria pomeroyi DSS-3

(2011) Jonathan D Todd et al.   ISME Journal

The GtaR protein negatively regulates transcription of the gtaRI operon and modulates gene transfer agent (RcGTA) expression in Rhodobacter capsulatus

(2011) Molly M. Leung et al.   MOLECULAR MICROBIOLOGY

Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria

(2011) Chris R. Reisch et al.   NATURE

The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis

(2011) Mohammad R. Seyedsayamdost et al.   Nature Chemistry

Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase

(2011) Y. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics

(2010) Frank J Stewart et al.   ISME Journal

2,3-Dihydroxypropane-1-sulfonate degraded by Cupriavidus pinatubonensis JMP134: purification of dihydroxypropanesulfonate 3-dehydrogenase

(2010) J. Mayer et al.   MICROBIOLOGY-SGM

Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence

(2010) Ahmed Moustafa et al.   PLoS One

Genes for transport and metabolism of spermidine in Ruegeria pomeroyi DSS-3 and other  marine bacteria

(2009) X Mou et al.   AQUATIC MICROBIAL ECOLOGY

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Bifurcated Degradative Pathway of 3-Sulfolactate in Roseovarius nubinhibens ISM via Sulfoacetaldehyde Acetyltransferase and (S)-Cysteate Sulfolyase

(2009) K. Denger et al.   JOURNAL OF BACTERIOLOGY

Nitrogen nutrition in assemblages dominated by Pseudo-nitzschia spp., Alexandrium catenella and Dinophysis acuminata off the west coast of South Africa

(2009) S Seeyave et al.   MARINE ECOLOGY PROGRESS SERIES

Occurrence and Expression of Gene Transfer Agent Genes in Marine Bacterioplankton

(2008) E. J. Biers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting seasonal patterns in dimethylsulfide, dimethylsulfoniopropionate, and chlorophyll a in a shallow North Carolina estuary and the Sargasso Sea

(2008) WG Sunda et al.   AQUATIC MICROBIAL ECOLOGY

Dimethylsulfoniopropionate-Dependent Demethylase (DmdA) from Pelagibacter ubique and Silicibacter pomeroyi

(2008) C. R. Reisch et al.   JOURNAL OF BACTERIOLOGY

Rapid chemotactic response enables marine bacteria to exploit ephemeral microscale nutrient patches

(2008) R. Stocker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA