The Fungal Mycobiome and Its Interaction with Gut Bacteria in the Host

Immunological Consequences of Intestinal Fungal Dysbiosis

(2016) Matthew L. Wheeler et al.   Cell Host & Microbe

Fungal microbiota dysbiosis in IBD

(2016) Harry Sokol et al.   GUT

Pulmonary Th17 Antifungal Immunity Is Regulated by the Gut Microbiome

(2016) Jeremy P. McAleer et al.   JOURNAL OF IMMUNOLOGY

Antibiotics, birth mode, and diet shape microbiome maturation during early life

(2016) Nicholas A. Bokulich et al.   Science Translational Medicine

How informative is the mouse for human gut microbiota research?

(2015) T. L. A. Nguyen et al.   Disease Models & Mechanisms

Gut Fungal Microbiota

(2015) Mathias L. Richard et al.   INFLAMMATORY BOWEL DISEASES

Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients

(2015) Giuseppina Liguori et al.   Journal of Crohns & Colitis

The human gut mycobiome: pitfalls and potentials--a mycologists perspective

(2015) M. J. Suhr et al.   MYCOLOGIA

Activation of HIF-1α and LL-37 by commensal bacteria inhibits Candida albicans colonization

(2015) Di Fan et al.   NATURE MEDICINE

Small molecules from the human microbiota

(2015) M. S. Donia et al.   SCIENCE

Dysbiosis of Fungal Microbiota in the Intestinal Mucosa of Patients with Colorectal Adenomas

(2015) Chunguang Luan et al.   Scientific Reports

Obesity changes the human gut mycobiome

(2015) M. Mar Rodríguez et al.   Scientific Reports

The Transcriptional Stress Response of Candida albicans to Weak Organic Acids

(2015) Fabien Cottier et al.   G3-Genes Genomes Genetics

The effect of antibacterial and non-antibacterial compounds alone or associated with antifugals upon fungi

(2015) Maria M. Azevedo et al.   Frontiers in Microbiology

Changes in the composition of intestinal fungi and their role in mice with dextran sulfate sodium-induced colitis

(2015) Xinyun Qiu et al.   Scientific Reports

Interplay between Candida albicans and the Antimicrobial Peptide Armory

(2014) Marc Swidergall et al.   EUKARYOTIC CELL

Gut microbiota–generated metabolites in animal health and disease

(2014) Won-Jae Lee et al.   Nature Chemical Biology

Mycobiota in gastrointestinal diseases

(2014) Pranab K. Mukherjee et al.   Nature Reviews Gastroenterology & Hepatology

Interactions between fungi and bacteria influence microbial community structure in the Megachile rotundata larval gut

(2014) Q. S. McFrederick et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Clinical and economic burden of invasive fungal diseases in Europe: focus on pre-emptive and empirical treatment of Aspergillus and Candida species

(2013) L. Drgona et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Immune status, antibiotic medication and pH are associated with changes in the stomach fluid microbiota

(2013) Erik C von Rosenvinge et al.   ISME Journal

Dysbiosis of Gut Fungal Microbiota is Associated With Mucosal Inflammation in Crohn’s Disease

(2013) Qiurong Li et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

High throughput sequencing methods and analysis for microbiome research

(2013) Julia M. Di Bella et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

(2013) Christian Hoffmann et al.   PLoS One

The emerging world of the fungal microbiome

(2013) Gary B. Huffnagle et al.   TRENDS IN MICROBIOLOGY

Modulation of Post-Antibiotic Bacterial Community Reassembly and Host Response by Candida albicans

(2013) John R. Erb Downward et al.   Scientific Reports

The human mycobiome in health and disease

(2013) Lijia Cui et al.   Genome Medicine

Effect of dietary β-glucan on growth performance, fecal microbial shedding and immunological responses after lipopolysaccharide challenge in weaned pigs

(2012) T.X. Zhou et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

The Role of Anti(myco)bacterial Interventions in the Management of IBD: Is There Evidence at All?

(2012) Guillaume P. Pineton de Chambrun et al.   DIGESTIVE DISEASES

Gut microbiota disturbance during antibiotic therapy: a multi-omic approach

(2012) Ana Elena Pérez-Cobas et al.   GUT

Enterococcus faecalis Inhibits Hyphal Morphogenesis and Virulence of Candida albicans

(2012) Melissa R. Cruz et al.   INFECTION AND IMMUNITY

Candida albicans and Bacterial Microbiota Interactions in the Cecum during Recolonization following Broad-Spectrum Antibiotic Therapy

(2012) Katie L. Mason et al.   INFECTION AND IMMUNITY

Genomic approaches to studying the human microbiota

(2012) George M. Weinstock   NATURE

Molecular Detection of Eukaryotes in a Single Human Stool Sample from Senegal

(2012) Ibrahim Hamad et al.   PLoS One

Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis

(2012) I. D. Iliev et al.   SCIENCE

Chapter 12: Human Microbiome Analysis

(2012) Xochitl C. Morgan et al.   PLoS Computational Biology

Mucosal Immunity andCandida albicansInfection

(2011) David L. Moyes et al.   Clinical & Developmental Immunology

Inflammation and gastrointestinal Candida colonization

(2011) Carol A Kumamoto   CURRENT OPINION IN MICROBIOLOGY

Modulation of Morphogenesis in Candida albicans by Various Small Molecules

(2011) Julie Shareck et al.   EUKARYOTIC CELL

Interplay between the Gastric Bacterial Microbiota and Candida albicans during Postantibiotic Recolonization and Gastritis

(2011) Katie L. Mason et al.   INFECTION AND IMMUNITY

Experimental and analytical tools for studying the human microbiome

(2011) Justin Kuczynski et al.   NATURE REVIEWS GENETICS

Creating and characterizing communities of human gut microbes in gnotobiotic mice

(2010) Jeremiah J Faith et al.   ISME Journal

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Short-Term Antibiotic Treatment Has Differing Long-Term Impacts on the Human Throat and Gut Microbiome

(2010) Hedvig E. Jakobsson et al.   PLoS One

Analyzing salt-marsh fungal diversity: comparing ARISA fingerprinting with clone sequencing and pyrosequencing

(2009) Patrick M. Gillevet et al.   Fungal Ecology

The NIH Human Microbiome Project

(2009) et al.   GENOME RESEARCH

Impact of the Intestinal Microbiota on the Development of Mucosal Defense

(2008) H. Rex Gaskins et al.   CLINICAL INFECTIOUS DISEASES

Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces

(2008) Pauline D Scanlan et al.   ISME Journal

Fungi and inflammatory bowel diseases: Alterations of composition and diversity

(2008) Stephan J. Ott et al.   SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY