Pneumococcal 23B Molecular Subtype Identified Using Whole Genome Sequencing
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Pneumococcal 23B Molecular Subtype Identified Using Whole Genome Sequencing
Authors
Keywords
-
Journal
Genome Biology and Evolution
Volume 9, Issue 8, Pages 2145-2158
Publisher
Oxford University Press (OUP)
Online
2017-05-10
DOI
10.1093/gbe/evx092
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Strain features and distributions in pneumococci from children with invasive disease before and after 13-valent conjugate vaccine implementation in the USA
- (2016) B.J. Metcalf et al. CLINICAL MICROBIOLOGY AND INFECTION
- Polysaccharide Capsule Composition of Pneumococcal Serotype 19A Subtypes Is Unaltered among Subtypes and Independent of the Nutritional Environment
- (2016) Silvio D. Brugger et al. INFECTION AND IMMUNITY
- Pneumococcus with the “6E”cpsLocus Produces Serotype 6B Capsular Polysaccharide
- (2016) Robert L. Burton et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Whole genome sequencing ofStreptococcus pneumoniae: development, evaluation and verification of targets for serogroup and serotype prediction using an automated pipeline
- (2016) Georgia Kapatai et al. PeerJ
- MOST: a modified MLST typing tool based on short read sequencing
- (2016) Rediat Tewolde et al. PeerJ
- Genomics Reveals the Worldwide Distribution of Multidrug-Resistant Serotype 6E Pneumococci
- (2015) Andries J. van Tonder et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Current methods for capsular typing of Streptococcus pneumoniae
- (2015) Elita Jauneikaite et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Effect of the 13-valent pneumococcal conjugate vaccine on invasive pneumococcal disease in England and Wales 4 years after its introduction: an observational cohort study
- (2015) Pauline A Waight et al. LANCET INFECTIOUS DISEASES
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Global Phylogenomic Analysis of Nonencapsulated Streptococcus pneumoniae Reveals a Deep-Branching Classic Lineage That Is Distinct from Multiple Sporadic Lineages
- (2014) Markus Hilty et al. Genome Biology and Evolution
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Novel Pneumococcal Serotypes 6C and 6D: Anomaly or Harbinger
- (2012) M. C. McEllistrem et al. CLINICAL INFECTIOUS DISEASES
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Capsule Type of Streptococcus pneumoniae Determines Growth Phenotype
- (2012) Lucy J. Hathaway et al. PLoS Pathogens
- Improved Detection of Nasopharyngeal Cocolonization by Multiple Pneumococcal Serotypes by Use of Latex Agglutination or Molecular Serotyping by Microarray
- (2011) P. Turner et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Rapid Pneumococcal Evolution in Response to Clinical Interventions
- (2011) N. J. Croucher et al. SCIENCE
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started