The Influence of Oyster Farming on Sediment Bacterial Communities

Living oysters and their shells as sites of nitrification and denitrification

(2016) Jane M. Caffrey et al.   MARINE POLLUTION BULLETIN

Sediment and Vegetation as Reservoirs of Vibrio vulnificus in the Tampa Bay Estuary and Gulf of Mexico

(2015) Eva Chase et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of Eastern Oysters (Crassostrea virginica) and Seasonality on Nitrite Reductase Gene Abundance (nirS, nirK, nrfA) in an Urban Estuary

(2015) Samantha Lindemann et al.   Estuaries and Coasts

Long-term nutrient addition differentially alters community composition and diversity of genes that control nitrous oxide flux from salt marsh sediments

(2015) Patrick J. Kearns et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Habitat context influences nitrogen removal by restored oyster reefs

(2015) Ashley R. Smyth et al.   JOURNAL OF APPLIED ECOLOGY

Identification of epiphytic bacterial communities associated with the brown alga Splachnidium rugosum

(2015) Mouna Abdalhamed Albakosh et al.   JOURNAL OF APPLIED PHYCOLOGY

The allometry of oysters: spatial and temporal variation in the length–biomass relationships for Crassostrea virginica

(2015) Eric N. Powell et al.   JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM

Suspension of oysters reduces the populations ofVibrio parahaemolyticusandVibrio vulnificus

(2015) K.M. Cole et al.   LETTERS IN APPLIED MICROBIOLOGY

piecewiseSEM: Piecewise structural equation modelling inr for ecology, evolution, and systematics

(2015) Jonathan S. Lefcheck   Methods in Ecology and Evolution

Eastern oyster (Crassostrea virginica) filtration, biodeposition, and sediment nitrogen cycling at two oyster reefs with contrasting water quality in Great Bay Estuary (New Hampshire, USA)

(2014) Timothy J. Hoellein et al.   BIOGEOCHEMISTRY

The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification

(2014) T.B.K. Reddy et al.   NUCLEIC ACIDS RESEARCH

Connecting the dots: linking nitrogen cycle gene expression to nitrogen fluxes in marine sediment mesocosms

(2014) Jennifer L. Bowen et al.   Frontiers in Microbiology

Vibrio diversity and dynamics in the Monterey Bay upwelling region

(2014) Sarah Mansergh et al.   Frontiers in Microbiology

Effect of eastern oysters (Crassostrea virginica) on sediment carbon and nitrogen dynamics in an urban estuary

(2013) Timothy J. Hoellein et al.   ECOLOGICAL APPLICATIONS

In-house validation of novel multiplex real-time PCR gene combination for the simultaneous detection of the main human pathogenic vibrios (Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus)

(2013) Alejandro Garrido-Maestu et al.   FOOD CONTROL

Oyster-mediated benthic-pelagic coupling modifies nitrogen pools and processes

(2013) AR Smyth et al.   MARINE ECOLOGY PROGRESS SERIES

Denitrification and nutrient assimilation on a restored oyster reef

(2013) ML Kellogg et al.   MARINE ECOLOGY PROGRESS SERIES

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Ecology of Vibrio parahaemolyticus and Vibrio vulnificus in the Coastal and Estuarine Waters of Louisiana, Maryland, Mississippi, and Washington (United States)

(2012) Crystal N. Johnson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Increasing Rates of Vibriosis in the United States, 1996–2010: Review of Surveillance Data From 2 Systems

(2012) Anna Newton et al.   CLINICAL INFECTIOUS DISEASES

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Microbial community composition in sediments resists perturbation by nutrient enrichment

(2011) Jennifer L Bowen et al.   ISME Journal

Habitat-specific distinctions in estuarine denitrification affect both ecosystem function and services

(2011) M. F. Piehler et al.   Ecosphere

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Epidemiology of Seafood-Associated Infections in the United States

(2010) M. Iwamoto et al.   CLINICAL MICROBIOLOGY REVIEWS

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Oyster (Crassostrea virginica, Gmelin 1791) Population Dynamics on Public Reefs in the Great Wicomico River, Virginia, USA

(2010) Melissa Southworth et al.   JOURNAL OF SHELLFISH RESEARCH

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Vibrios as causal agents of zoonoses

(2009) B. Austin   VETERINARY MICROBIOLOGY

Coastal nitrogen pollution: A review of sources and trends globally and regionally

(2008) Robert W. Howarth   HARMFUL ALGAE

Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment

(2008) J. F. Biddle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE