Effect of Eastern Oysters (Crassostrea virginica) and Seasonality on Nitrite Reductase Gene Abundance (nirS, nirK, nrfA) in an Urban Estuary

Eastern oyster (Crassostrea virginica) filtration, biodeposition, and sediment nitrogen cycling at two oyster reefs with contrasting water quality in Great Bay Estuary (New Hampshire, USA)

(2014) Timothy J. Hoellein et al.   BIOGEOCHEMISTRY

Use of oysters to mitigate eutrophication in coastal waters

(2014) M. Lisa Kellogg et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Connecting the dots: linking nitrogen cycle gene expression to nitrogen fluxes in marine sediment mesocosms

(2014) Jennifer L. Bowen et al.   Frontiers in Microbiology

Linking DNRA community structure and activity in a shallow lagoonal estuarine system

(2014) Bongkeun Song et al.   Frontiers in Microbiology

Nitrifying and denitrifying microbial communities and their relationship to nutrient fluxes and sediment geochemistry in the Derwent Estuary, Tasmania

(2013) GCJ Abell et al.   AQUATIC MICROBIAL ECOLOGY

Effect of eastern oysters (Crassostrea virginica) on sediment carbon and nitrogen dynamics in an urban estuary

(2013) Timothy J. Hoellein et al.   ECOLOGICAL APPLICATIONS

Below the disappearing marshes of an urban estuary: historic nitrogen trends and soil structure

(2013) Cathleen Wigand et al.   ECOLOGICAL APPLICATIONS

Abundance of denitrification genes under different peizometer depths in four Irish agricultural groundwater sites

(2013) Maria Barrett et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Benthic metabolism and nitrogen dynamics in an urbanised tidal creek: Domination of DNRA over denitrification as a nitrate reduction pathway

(2013) Ryan J.K. Dunn et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Oyster-mediated benthic-pelagic coupling modifies nitrogen pools and processes

(2013) AR Smyth et al.   MARINE ECOLOGY PROGRESS SERIES

Denitrification and nutrient assimilation on a restored oyster reef

(2013) ML Kellogg et al.   MARINE ECOLOGY PROGRESS SERIES

Evidence and a conceptual model for the co‑occurrence of nitrogen fixation and denitrification in heterotrophic marine sediments

(2013) RW Fulweiler et al.   MARINE ECOLOGY PROGRESS SERIES

The Importance of Dissimilatory Nitrate Reduction to Ammonium (DNRA) in the Nitrogen Cycle of Coastal Ecosystems

(2013) Anne Giblin et al.   OCEANOGRAPHY

Resource Availability Effects on Nitrate-Reducing Microbial Communities in a Freshwater Wetland

(2013) Ember M. Morrissey et al.   WETLANDS

Differential responses of ammonia-oxidizing archaea and bacteria to long-term fertilization in a New England salt marsh

(2013) Xuefeng Peng et al.   Frontiers in Microbiology

Spatial differences in denitrification and bacterial community structure of streams: relationships with environmental conditions

(2012) Alyssa M. Baxter et al.   AQUATIC SCIENCES

Economic Valuation of Ecosystem Services Provided by Oyster Reefs

(2012) Jonathan H. Grabowski et al.   BIOSCIENCE

Abundance of microbial genes associated with nitrogen cycling as indices of biogeochemical process rates across a vegetation gradient in Alaska

(2012) Dorthe Groth Petersen et al.   ENVIRONMENTAL MICROBIOLOGY

Assessing Nitrogen Dynamics Throughout the Estuarine Landscape

(2012) Ashley R. Smyth et al.   Estuaries and Coasts

Spatial distribution of N-cycling microbial communities showed complex patterns in constructed wetland sediments

(2012) David Correa-Galeote et al.   FEMS MICROBIOLOGY ECOLOGY

Influence of oyster culture on biogeochemistry and bacterial community structure at the sediment-water interface

(2012) Afi Azandégbé et al.   FEMS MICROBIOLOGY ECOLOGY

A New Non-Degenerate Primer Pair for the Specific Detection of the Nitrite Reductase GenenrfAin the GenusDesulfovibrio

(2012) L. Giacomucci et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Effect of aquacultured oyster biodeposition on sediment N2 production in Chesapeake Bay

(2012) CB Higgins et al.   MARINE ECOLOGY PROGRESS SERIES

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

Factors Driving Potential Ammonia Oxidation in Canadian Arctic Ecosystems: Does Spatial Scale Matter?

(2011) Samiran Banerjee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Oyster Reefs at Risk and Recommendations for Conservation, Restoration, and Management

(2011) Michael W. Beck et al.   BIOSCIENCE

Climate Change, Precipitation and Impacts on an Estuarine Refuge from Disease

(2011) Jeffrey Levinton et al.   PLoS One

Nitrate removal, communities of denitrifiers and adverse effects in different carbon substrates for use in denitrification beds

(2011) Sören Warneke et al.   WATER RESEARCH

Habitat-specific distinctions in estuarine denitrification affect both ecosystem function and services

(2011) M. F. Piehler et al.   Ecosphere

Quantification of Nitrogen Reductase and Nitrite Reductase Genes in Soil of Thinned and Clear-Cut Douglas-Fir Stands by Using Real-Time PCR

(2010) D. J. Levy-Booth et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Denitrifying Bacteria Isolated from Terrestrial Subsurface Sediments Exposed to Mixed-Waste Contamination

(2010) S. J. Green et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil Resources Influence Spatial Patterns of Denitrifying Communities at Scales Compatible with Land Management

(2010) K. Enwall et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil environmental conditions rather than denitrifier abundance and diversity drive potential denitrification after changes in land uses

(2010) E. ATTARD et al.   GLOBAL CHANGE BIOLOGY

Bacterial gene abundances as indicators of greenhouse gas emission in soils

(2010) Sergio E Morales et al.   ISME Journal

Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries

(2010) Liang F. Dong et al.   LIMNOLOGY AND OCEANOGRAPHY

Different responses of denitrification rates and denitrifying bacterial communities to hydrologic pulsing in created wetlands

(2010) Keunyea Song et al.   SOIL BIOLOGY & BIOCHEMISTRY

Denitrifier abundance and activity across the San Francisco Bay estuary

(2010) Annika C. Mosier et al.   Environmental Microbiology Reports

Changes in Benthic Denitrification, Nitrate Ammonification, and Anammox Process Rates and Nitrate and Nitrite Reductase Gene Abundances along an Estuarine Nutrient Gradient (the Colne Estuary, United Kingdom)

(2009) L. F. Dong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Nitrogen dynamics at the sediment–water interface in shallow, sub-tropical Florida Bay: why denitrification efficiency may decrease with increased eutrophication

(2009) Wayne S. Gardner et al.   BIOGEOCHEMISTRY

Spatial Heterogeneity of Denitrification Genes in a Highly Homogenous Urban Stream

(2009) Charles W. Knapp et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Shifts in size, genetic structure and activity of the soil denitrifier community by nematode grazing

(2009) Djibril Djigal et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment

(2009) Sara Hallin et al.   ISME Journal

Revising the nitrogen cycle in the Peruvian oxygen minimum zone

(2009) P. Lam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct seeding mulch-based cropping increases both the activity and the abundance of denitrifier communities in a tropical soil

(2009) Ezékiel Baudoin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in Bacterial Denitrifier Community Abundance over Time in an Agricultural Field and Their Relationship with Denitrification Activity

(2008) C. E. Dandie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sediment denitrifier community composition andnirSgene expression investigated with functional gene microarrays

(2008) Silvia E. Bulow et al.   ENVIRONMENTAL MICROBIOLOGY