Abundant and rare picoeukaryotic sub-communities present contrasting patterns in the epipelagic waters of marginal seas in the northwestern Pacific Ocean

A guide to phylogenetic metrics for conservation, community ecology and macroecology

(2016) Caroline M. Tucker et al.   BIOLOGICAL REVIEWS

Light and electron microscopic observations of the reproductive swarmer cells of nassellarian and spumellarian polycystines (Radiolaria)

(2016) Tomoko Yuasa et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans

(2016) Adam Monier et al.   Environmental Microbiology Reports

Metacommunity speciation models and their implications for diversification theory

(2015) Nicolas Hubert et al.   ECOLOGY LETTERS

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems

(2015) Jun Gong et al.   ENVIRONMENTAL MICROBIOLOGY

The hidden seasonality of the rare biosphere in coastal marine bacterioplankton

(2015) Laura Alonso-Sáez et al.   ENVIRONMENTAL MICROBIOLOGY

Latitudinal variation in virus-induced mortality of phytoplankton across the North Atlantic Ocean

(2015) Kristina D A Mojica et al.   ISME Journal

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Evidence for an active rare biosphere within freshwater protists community

(2015) Didier Debroas et al.   MOLECULAR ECOLOGY

Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Rarity in aquatic microbes: placing protists on the map

(2015) Ramiro Logares et al.   RESEARCH IN MICROBIOLOGY

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Microbial eukaryotic diversity and distribution in a river plume and cyclonic eddy-influenced ecosystem in the South China Sea

(2015) Wenxue Wu et al.   MicrobiologyOpen

Picoeukaryote distribution in relation to nitrate uptake in the oceanic nitracline

(2014) SC Painter et al.   AQUATIC MICROBIAL ECOLOGY

Patterns of Rare and Abundant Marine Microbial Eukaryotes

(2014) Ramiro Logares et al.   CURRENT BIOLOGY

Determinism of bacterial metacommunity dynamics in the southern East China Sea varies depending on hydrography

(2014) Yi-Chun Yeh et al.   ECOGRAPHY

Species sorting determines variation in the community composition of common and rare macrophytes at various spatial extents

(2014) Janne Alahuhta et al.   Ecological Complexity

Loss of Rare Fish Species from Tropical Floodplain Food Webs Affects Community Structure and Ecosystem Multifunctionality in a Mesocosm Experiment

(2014) Richard M. Pendleton et al.   PLoS One

A molecular survey of protist diversity through the central Arctic Ocean

(2014) Estelle Kilias et al.   POLAR BIOLOGY

Statistical methods for temporal and space-time analysis of community composition data

(2014) P. Legendre et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean

(2013) KL Vergin et al.   AQUATIC MICROBIAL ECOLOGY

Photosynthetic picoeukaryote assemblages in the South China Sea from the Pearl River estuary to the SEATS station

(2013) W Wu et al.   AQUATIC MICROBIAL ECOLOGY

Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters

(2013) Fernando Unrein et al.   ISME Journal

Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles

(2013) Ramon Massana et al.   ISME Journal

Diversity, Ecology and Biogeochemistry of Cyst-Forming Acantharia (Radiolaria) in the Oceans

(2013) Johan Decelle et al.   PLoS One

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters

(2013) M. Hugoni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rare Species Support Vulnerable Functions in High-Diversity Ecosystems

(2013) David Mouillot et al.   PLOS BIOLOGY

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

(2012) Laure Guillou et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The Rare Bacterial Biosphere

(2011) Carlos Pedrós-Alió   Annual Review of Marine Science

Common and rare species respond to similar niche processes in macroinvertebrate metacommunities

(2011) Tadeu Siqueira et al.   ECOGRAPHY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Sedimentation of acantharian cysts in the Iceland Basin: Strontium as a ballast for deep ocean particle flux, and implications for acantharian reproductive strategies

(2011) Patrick Martin et al.   LIMNOLOGY AND OCEANOGRAPHY

Activity of abundant and rare bacteria in a coastal ocean

(2011) B. J. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Increasing N Abundance in the Northwestern Pacific Ocean Due to Atmospheric Nitrogen Deposition

(2011) T.-W. Kim et al.   SCIENCE

Eukaryotic Picoplankton in Surface Oceans

(2010) Ramon Massana   Annual Review of Microbiology

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland

(2010) Michael Pester et al.   ISME Journal

Water masses and biogeography of picoeukaryote assemblages in a cold hydrographically complex system

(2010) Andrew K. Hamilton et al.   LIMNOLOGY AND OCEANOGRAPHY

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

(2010) Jens Reeder et al.   NATURE METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasts between habitat generalists and specialists: an empirical extension to the basic metacommunity framework

(2009) Shubha N. Pandit et al.   ECOLOGY

Regional invariance among microbial communities

(2009) Örjan Östman et al.   ECOLOGY LETTERS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

New Insights into the Diversity of Marine Picoeukaryotes

(2009) Fabrice Not et al.   PLoS One

Widespread occurrence and genetic diversity of marine parasitoids belonging toSyndiniales(Alveolata)

(2008) L. Guillou et al.   ENVIRONMENTAL MICROBIOLOGY

A single-cell view on the ecophysiology of anaerobic phototrophic bacteria

(2008) N. Musat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA