Metaproteomics reveals major microbial players and their metabolic activities during the blooming period of a marine dinoflagellate Prorocentrum donghaiense

Transcriptional response of Prochlorococcus to co-culture with a marine Alteromonas: differences between strains and the involvement of putative infochemicals

(2016) Dikla Aharonovich et al.   ISME Journal

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms

(2016) Hanno Teeling et al.   eLife

Post-translational modifications are enriched within protein functional groups important to bacterial adaptation within a deep-sea hydrothermal vent environment

(2016) Weipeng Zhang et al.   Microbiome

Pronounced daily succession of phytoplankton, archaea and bacteria following a spring bloom

(2016) David M. Needham et al.   Nature Microbiology

Comparative proteomics reveals highly and differentially expressed proteins in field-collected and laboratory-cultured blooming cells of the diatomSkeletonema costatum

(2015) Hao Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

An association network analysis among microeukaryotes and bacterioplankton reveals algal bloom dynamics

(2015) Shangjin Tan et al.   JOURNAL OF PHYCOLOGY

Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom

(2014) Kevin Penn et al.   ISME Journal

Master recyclers: features and functions of bacteria associated with phytoplankton blooms

(2014) Alison Buchan et al.   NATURE REVIEWS MICROBIOLOGY

Metaproteomics reveals the major microbial players and their biogeochemical functions in a productive coastal system in the northern South China Sea

(2014) Hong-Po Dong et al.   Environmental Microbiology Reports

Interactions between marine bacteria and red tide organisms in Korean waters

(2014) Kyeong Ah Seong et al.   ALGAE

Discrimination between the influences of river discharge and coastal upwelling on summer microphytoplankton phosphorus stress in the East China Sea

(2013) Hung-Chun Liu et al.   CONTINENTAL SHELF RESEARCH

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Bacterial community dynamics during a bloom caused by Akashiwo sanguinea in the Xiamen sea area, China

(2012) Caiyun Yang et al.   HARMFUL ALGAE

A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters

(2012) Timothy J Williams et al.   ISME Journal

Interactions between Diatoms and Bacteria

(2012) S. A. Amin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Distribution and Functions of TonB-Dependent Transporters in Marine Bacteria and Environments: Implications for Dissolved Organic Matter Utilization

(2012) Kai Tang et al.   PLoS One

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Progress in Understanding Harmful Algal Blooms: Paradigm Shifts and New Technologies for Research, Monitoring, and Management

(2011) Donald M. Anderson et al.   Annual Review of Marine Science

Differing Growth Responses of Major Phylogenetic Groups of Marine Bacteria to Natural Phytoplankton Blooms in the Western North Pacific Ocean

(2011) Yuya Tada et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

(2011) Chris L Dupont et al.   ISME Journal

Shotgun proteomics: Tools for analysis of marine particulate proteins

(2011) Hong-Po Dong et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Phytoplankton community succession shaping bacterioplankton community composition in Lake Taihu, China

(2011) Yuan Niu et al.   WATER RESEARCH

Marine bacteria antagonistic to the harmful algal bloom species Alexandrium tamarense (Dinophyceae)

(2010) Jianqiang Su et al.   BIOLOGICAL CONTROL

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

(2010) Sarah M Sowell et al.   ISME Journal

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

(2010) Robert M Morris et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Three-dimensional fluorescence characteristics of dissolved organic matter produced by Prorocentrum donghaiense Lu

(2009) Weihong Zhao et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity

(2009) M. S. Schwalbach et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial community gene expression within colonies of the diazotroph, Trichodesmium, from the Southwest Pacific Ocean

(2009) Ian Hewson et al.   ISME Journal

The substrate-binding protein imposes directionality on an electrochemical sodium gradient-driven TRAP transporter

(2009) Christopher Mulligan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ecology of type II secretion in marine gammaproteobacteria

(2008) Flavia F. Evans et al.   ENVIRONMENTAL MICROBIOLOGY

The small genome of an abundant coastal ocean methylotroph

(2008) Stephen J. Giovannoni et al.   ENVIRONMENTAL MICROBIOLOGY

Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11

(2008) H. James Tripp et al.   ENVIRONMENTAL MICROBIOLOGY

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea

(2008) Sarah M Sowell et al.   ISME Journal

BACTERIA-INDUCED MOTILITY REDUCTION INLINGULODINIUM POLYEDRUM(DINOPHYCEAE)1

(2008) Xavier Mayali et al.   JOURNAL OF PHYCOLOGY

Selective Control of the Prorocentrum minimum Harmful Algal Blooms by a Novel Algal-Lytic Bacterium Pseudoalteromonas haloplanktis AFMB-008041

(2008) Jeong-Dong Kim et al.   MARINE BIOTECHNOLOGY

SAR11 marine bacteria require exogenous reduced sulphur for growth

(2008) H. James Tripp et al.   NATURE

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY

Trends in Selenium Utilization in Marine Microbial World Revealed through the Analysis of the Global Ocean Sampling (GOS) Project

(2008) Yan Zhang et al.   PLoS Genetics

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

(2008) Susan M. Huse et al.   PLoS Genetics

Growth-promoting effects of a bacterium on raphidophytes and other phytoplankton

(2007) Jiqing Liu et al.   HARMFUL ALGAE