The roles of the outdoors and occupants in contributing to a potential pan-microbiome of the built environment: a review

Indoor air bacterial communities in Hong Kong households assemble independently of occupant skin microbiomes

(2015) David Wilkins et al.   ENVIRONMENTAL MICROBIOLOGY

Key determinants of the fungal and bacterial microbiomes in homes

(2015) Eric M. Kettleson et al.   ENVIRONMENTAL RESEARCH

Impacts of Flood Damage on Airborne Bacteria and Fungi in Homes after the 2013 Colorado Front Range Flood

(2015) Joanne B. Emerson et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Indoor Emissions as a Primary Source of Airborne Allergenic Fungal Particles in Classrooms

(2015) Naomichi Yamamoto et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children

(2015) K. C. Dannemiller et al.   INDOOR AIR

A phylo-functional core of gut microbiota in healthy young Chinese cohorts across lifestyles, geography and ethnicities

(2015) Jiachao Zhang et al.   ISME Journal

Temporal changes in the skinMalasseziamicrobiota of members of the Japanese Antarctic Research Expedition (JARE): A case study in Antarctica as a pseudo-space environment

(2015) Takashi Sugita et al.   MEDICAL MYCOLOGY

Microbiology: Create a global microbiome effort

(2015) Nicole Dubilier et al.   NATURE

Metagenomic Insights into the Bioaerosols in the Indoor and Outdoor Environments of Childcare Facilities

(2015) Su-Kyoung Shin et al.   PLoS One

Continental-scale distributions of dust-associated bacteria and fungi

(2015) Albert Barberán et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identifying personal microbiomes using metagenomic codes

(2015) Eric A. Franzosa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The ecology of microscopic life in household dust

(2015) Albert Barberán et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A unified initiative to harness Earth's microbiomes

(2015) A. P. Alivisatos et al.   SCIENCE

Fecal microbes, short chain fatty acids, and colorectal cancer across racial/ethnic groups

(2015) Christina M Hester   WORLD JOURNAL OF GASTROENTEROLOGY

Subsistence strategies in traditional societies distinguish gut microbiomes

(2015) Alexandra J. Obregon-Tito et al.   Nature Communications

Insights into the pan-microbiome: skin microbial communities of Chinese individuals differ from other racial groups

(2015) Marcus H. Y. Leung et al.   Scientific Reports

Diversity in gut bacterial community of school-age children in Asia

(2015) Jiro Nakayama et al.   Scientific Reports

The Gut Microbiota of Rural Papua New Guineans: Composition, Diversity Patterns, and Ecological Processes

(2015) Inés Martínez et al.   Cell Reports

Spatial distribution of marine airborne bacterial communities

(2015) Jasmin S. Seifried et al.   MicrobiologyOpen

Humans differ in their personal microbial cloud

(2015) James F. Meadow et al.   PeerJ

Microbiota of the indoor environment: a meta-analysis

(2015) Rachel I. Adams et al.   Microbiome

Forensic analysis of the microbiome of phones and shoes

(2015) Simon Lax et al.   Microbiome

Athletic equipment microbiota are shaped by interactions with human skin

(2015) Mariah Wood et al.   Microbiome

A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses

(2015) Thomas Weinmaier et al.   Microbiome

Microbial biogeography of a university campus

(2015) Ashley A. Ross et al.   Microbiome

Relative and contextual contribution of different sources to the composition and abundance of indoor air bacteria in residences

(2015) Marzia Miletto et al.   Microbiome

The microbiome of the built environment and mental health

(2015) Andrew J. Hoisington et al.   Microbiome

Microbial aerosol liberation from soiled textiles isolated during routine residuals handling in a modern health care setting

(2015) Alina Handorean et al.   Microbiome

The first microbial environment of infants born by C-section: the operating room microbes

(2015) Hakdong Shin et al.   Microbiome

Sources of airborne microorganisms in the built environment

(2015) Aaron J. Prussin et al.   Microbiome

The vocabulary of microbiome research: a proposal

(2015) Julian R. Marchesi et al.   Microbiome

Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics

(2015) Ebrahim Afshinnekoo et al.   Cell Systems

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

‘Ethnic skin’ and why the study of human cutaneous diversity is important

(2015) N.G. Jablonski   BRITISH JOURNAL OF DERMATOLOGY

Spatial and Temporal Variations in Indoor Environmental Conditions, Human Occupancy, and Operational Characteristics in a New Hospital Building

(2015) Tiffanie Ramos et al.   PLoS One

Fungi Identify the Geographic Origin of Dust Samples

(2015) Neal S. Grantham et al.   PLoS One

Chamber Bioaerosol Study: Outdoor Air and Human Occupants as Sources of Indoor Airborne Microbes

(2015) Rachel I. Adams et al.   PLoS One

The Influence of Age and Gender on Skin-Associated Microbial Communities in Urban and Rural Human Populations

(2015) Shi Ying et al.   PLoS One

Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance

(2015) Thomas Nordahl Petersen et al.   Scientific Reports

Indoor-Air Microbiome in an Urban Subway Network: Diversity and Dynamics

(2014) Marcus H. Y. Leung et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecological Succession and Viability of Human-Associated Microbiota on Restroom Surfaces

(2014) Sean M. Gibbons et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterizing airborne fungal and bacterial concentrations and emission rates in six occupied children's classrooms

(2014) D. Hospodsky et al.   INDOOR AIR

Effects of early-life exposure to allergens and bacteria on recurrent wheeze and atopy in urban children

(2014) Susan V. Lynch et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Hand bacterial communities vary across two different human populations

(2014) D. Hospodsky et al.   MICROBIOLOGY-SGM

Airborne Bacterial Communities in Residences: Similarities and Differences with Fungi

(2014) Rachel I. Adams et al.   PLoS One

Architectural Design Drives the Biogeography of Indoor Bacterial Communities

(2014) Steven W. Kembel et al.   PLoS One

Characterization of Fecal Microbiota across Seven Chinese Ethnic Groups by Quantitative Polymerase Chain Reaction

(2014) Lai-yu Kwok et al.   PLoS One

Longitudinal analysis of microbial interaction between humans and the indoor environment

(2014) S. Lax et al.   SCIENCE

‘Core species’ in three sources of indoor air belonging to the human micro-environment to the exclusion of outdoor air

(2014) Carole Gaüzère et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Gut microbiome of the Hadza hunter-gatherers

(2014) Stephanie L. Schnorr et al.   Nature Communications

Diversity of Bacterial Communities of Fitness Center Surfaces in a U.S. Metropolitan Area

(2014) Nabanita Mukherjee et al.   International Journal of Environmental Research and Public Health

Host lifestyle affects human microbiota on daily timescales

(2014) Lawrence A David et al.   GENOME BIOLOGY

Mobile phones carry the personal microbiome of their owners

(2014) James F. Meadow et al.   PeerJ

Bacterial communities on classroom surfaces vary with human contact

(2014) James F Meadow et al.   Microbiome

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants

(2014) Brandon Brooks et al.   Microbiome

Culture-Independent Analysis of Aerosol Microbiology in a Metropolitan Subway System

(2013) Charles E. Robertson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temporal variation in airborne microbial populations and microbially-derived allergens in a tropical urban landscape

(2013) Anthony C. Woo et al.   ATMOSPHERIC ENVIRONMENT

Pyrosequencing analysis of the human microbiota of healthy Chinese undergraduates

(2013) Zongxin Ling et al.   BMC GENOMICS

Identification of Household Bacterial Community and Analysis of Species Shared with Human Microbiome

(2013) Yoon-Seong Jeon et al.   CURRENT MICROBIOLOGY

Stability of airborne microbes in the Louvre Museum over time

(2013) C. Gaüzère et al.   INDOOR AIR

Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source

(2013) J. F. Meadow et al.   INDOOR AIR

Next-generation DNA sequencing reveals that low fungal diversity in house dust is associated with childhood asthma development

(2013) K. C. Dannemiller et al.   INDOOR AIR

Stenotrophomonas, Mycobacterium,andStreptomycesin home dust and air: associations with moldiness and other home/family characteristics

(2013) E. Kettleson et al.   INDOOR AIR

Biofilm Formation Enhances Fomite Survival of Streptococcus pneumoniae and Streptococcus pyogenes

(2013) Laura R. Marks et al.   INFECTION AND IMMUNITY

Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances

(2013) Rachel I Adams et al.   ISME Journal

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment

(2013) Elizabeth M Glass et al.   ISME Journal

Airborne Bacterial Populations Above Desert Soils of the McMurdo Dry Valleys, Antarctica

(2013) Eric M. Bottos et al.   MICROBIAL ECOLOGY

Topographic diversity of fungal and bacterial communities in human skin

(2013) Keisha Findley et al.   NATURE

Home Life: Factors Structuring the Bacterial Diversity Found within and between Homes

(2013) Robert R. Dunn et al.   PLoS One

Deep Sequencing Identifies Ethnicity-Specific Bacterial Signatures in the Oral Microbiome

(2013) Matthew R. Mason et al.   PLoS One

The Diversity and Distribution of Fungi on Residential Surfaces

(2013) Rachel I. Adams et al.   PLoS One

House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection

(2013) K. E. Fujimura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiome of the upper troposphere: Species composition and prevalence, effects of tropical storms, and atmospheric implications

(2013) N. DeLeon-Rodriguez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The uses of race and ethnicity in human microbiome research

(2013) J. Dennis Fortenberry   TRENDS IN MICROBIOLOGY

Advection shapes Southern Ocean microbial assemblages independent of distance and environment effects

(2013) David Wilkins et al.   Nature Communications

The ignored diversity: complex bacterial communities in intensive care units revealed by 16S pyrosequencing

(2013) Lisa Oberauner et al.   Scientific Reports

Studying the microbiology of the indoor environment

(2013) Scott T Kelley et al.   GENOME BIOLOGY

Significant changes in the skin microbiome mediated by the sport of roller derby

(2013) James F. Meadow et al.   PeerJ

Seasonal Variations of Indoor Microbial Exposures and Their Relation to Temperature, Relative Humidity, and Air Exchange Rate

(2012) Mika Frankel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Seasonal variability in airborne bacterial communities at a high-elevation site

(2012) Robert M. Bowers et al.   ATMOSPHERIC ENVIRONMENT

Diversity, distribution and sources of bacteria in residential kitchens

(2012) Gilberto E. Flores et al.   ENVIRONMENTAL MICROBIOLOGY

Size-resolved emission rates of airborne bacteria and fungi in an occupied classroom

(2012) J. Qian et al.   INDOOR AIR

Architectural design influences the diversity and structure of the built environment microbiome

(2012) Steven W Kembel et al.   ISME Journal

Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents

(2012) Martin J Blaser et al.   ISME Journal

New perspectives on viable microbial communities in low-biomass cleanroom environments

(2012) Parag Vaishampayan et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Utilizing pyrosequencing and quantitative PCR to characterize fungal populations among house dust samples

(2012) Matthew W. Nonnenmann et al.   JOURNAL OF ENVIRONMENTAL MONITORING

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Human Occupancy as a Source of Indoor Airborne Bacteria

(2012) Denina Hospodsky et al.   PLoS One

Office Space Bacterial Abundance and Diversity in Three Metropolitan Areas

(2012) Krissi M. Hewitt et al.   PLoS One

Exploring Bacterial Diversity in Hospital Environments by GS-FLX Titanium Pyrosequencing

(2012) Margarita Poza et al.   PLoS One

Insights from Characterizing Extinct Human Gut Microbiomes

(2012) Raul Y. Tito et al.   PLoS One

Environmental biodiversity, human microbiota, and allergy are interrelated

(2012) I. Hanski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiome dynamics of human epidermis following skin barrier disruption

(2012) Patrick LJM Zeeuwen et al.   GENOME BIOLOGY

Microbes in High Arctic Snow and Implications for the Cold Biosphere

(2011) Tommy Harding et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular profiling of fungal communities in moisture damaged buildings before and after remediation - a comparison of culture-dependent and culture-independent methods

(2011) Miia Pitkäranta et al.   BMC MICROBIOLOGY

Gram-positive bacteria on grass pollen exhibit adjuvant activity inducing inflammatory T cell responses

(2011) B. Heydenreich et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Dishwashers – A man-made ecological niche accommodating human opportunistic fungal pathogens

(2011) P. Zalar et al.   Fungal Biology

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Exposure to Environmental Microorganisms and Childhood Asthma

(2011) Markus J. Ege et al.   NEW ENGLAND JOURNAL OF MEDICINE

Microbial Biogeography of Public Restroom Surfaces

(2011) Gilberto E. Flores et al.   PLoS One

Zero Energy Building – A review of definitions and calculation methodologies

(2010) A.J. Marszal et al.   ENERGY AND BUILDINGS

Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments

(2010) Robert M Bowers et al.   ISME Journal

Man's best friend? The effect of pet ownership on house dust microbial communities

(2010) Kei E. Fujimura et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Biodiversity and biogeography of the atmosphere

(2010) A. M. Womack et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Forensic identification using skin bacterial communities

(2010) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics

(2010) A. S. Amend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens

The Association of Immigration and Acculturation Attributes With Oral Health Among Immigrants in New York City

(2009) Gustavo D. Cruz et al.   AMERICAN JOURNAL OF PUBLIC HEALTH

Assessment of microbiological indoor air quality in an Italian office building equipped with an HVAC system

(2009) Sa. Bonetta et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Global diversity in the human salivary microbiome

(2009) I. Nasidze et al.   GENOME RESEARCH

Molds and mycotoxins in dust from water-damaged homes in New Orleans after hurricane Katrina

(2009) E. Bloom et al.   INDOOR AIR

The occupant as a source of house dust bacteria

(2009) Martin Täubel et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Opportunistic pathogens enriched in showerhead biofilms

(2009) L. M. Feazel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Topographical and Temporal Diversity of the Human Skin Microbiome

(2009) E. A. Grice et al.   SCIENCE

Diversity and seasonal dynamics of bacterial community in indoor environment

(2008) Helena Rintala et al.   BMC MICROBIOLOGY

The Airborne Metagenome in an Indoor Urban Environment

(2008) Susannah G. Tringe et al.   PLoS One

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

(2008) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA