Insights from Characterizing Extinct Human Gut Microbiomes

Zoonotic and Human Parasites of Inhabitants of Cueva de Los Muertos Chiquitos, Rio Zape Valley, Durango, Mexico

(2012) F. Agustín Jiménez et al.   JOURNAL OF PARASITOLOGY

Brief communication: DNA from early Holocene American dog

(2011) Raul Y. Tito et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Stop the killing of beneficial bacteria

(2011) Martin Blaser   NATURE

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Role of the gut microbiota in defining human health

(2010) Kei E Fujimura et al.   Expert Review of Anti-Infective Therapy

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

(2010) Howard Ochman et al.   PLOS BIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Human Intestinal Microbiome: A New Frontier of Human Biology

(2009) M. Hattori et al.   DNA RESEARCH

Targeting the Human Microbiome With Antibiotics, Probiotics, and Prebiotics: Gastroenterology Enters the Metagenomics Era

(2009) Geoffrey A. Preidis et al.   GASTROENTEROLOGY

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

(2009) M. Hamady et al.   GENOME RESEARCH

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE

Changes in Bacterial Communities Accompanied by Aggregation in a Fed-Batch Composting Reactor

(2008) Keiko Watanabe et al.   CURRENT MICROBIOLOGY

Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing

(2008) Anders F. Andersson et al.   PLoS One

Phylotyping and Functional Analysis of Two Ancient Human Microbiomes

(2008) Raúl Y. Tito et al.   PLoS One

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE