CCP-FEL: a collection of computer programs for free-electron laser research

Macromolecular diffractive imaging using imperfect crystals

(2016) Kartik Ayyer et al.   NATURE

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein

(2016) K. Pande et al.   SCIENCE

XMDYNandXATOM: versatile simulation tools for quantitative modeling of X-ray free-electron laser induced dynamics of matter

(2016) Zoltan Jurek et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Recent developments inCrystFEL

(2016) Thomas A. White et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Modeling truncated pixel values of faint reflections in MicroED images

(2016) Johan Hattne et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Facilitating model reconstruction for single-particle scattering using small-angle X-ray scattering methods

(2016) Shufen Ma et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Data processing pipeline for serial femtosecond crystallography at SACLA

(2016) Takanori Nakane et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time

(2016) Benedikt J. Daurer et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Identification of rogue datasets in serial crystallography

(2016) Greta Assmann et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

WavePropaGator: interactive framework for X-ray free-electron laser optics design and simulations

(2016) Liubov Samoylova et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

On the release ofcppxfelfor processing X-ray free-electron laser images

(2016) Helen Mary Ginn et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

CFEL–ASG Software Suite(CASS): usage for free-electron laser experiments with biological focus

(2016) Lutz Foucar   JOURNAL OF APPLIED CRYSTALLOGRAPHY

IOTA: integration optimization, triage and analysis tool for the processing of XFEL diffraction images

(2016) Artem Y. Lyubimov et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

OnDA: online data analysis and feedback for serial X-ray imaging

(2016) Valerio Mariani et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Data systems for the Linac Coherent Light Source

(2016) J. Thayer et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Linac Coherent Light Source data analysis usingpsana

(2016) D. Damiani et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Dragonfly: an implementation of the expand–maximize–compress algorithm for single-particle imaging

(2016) Kartik Ayyer et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Condor: a simulation tool for flash X-ray imaging

(2016) Max F. Hantke et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser

(2016) Tomas Ekeberg et al.   Scientific Data

A data set from flash X-ray imaging of carboxysomes

(2016) Max F. Hantke et al.   Scientific Data

Open data set of live cyanobacterial cells imaged using an X-ray laser

(2016) Gijs van der Schot et al.   Scientific Data

Serial femtosecond crystallography datasets from G protein-coupled receptors

(2016) Thomas A. White et al.   Scientific Data

X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex

(2016) X. Edward Zhou et al.   Scientific Data

The trickle before the torrent—diffraction data from X-ray lasers

(2016) Filipe R.N.C. Maia et al.   Scientific Data

Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source

(2016) Anna Munke et al.   Scientific Data

Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser

(2015) Tomas Ekeberg et al.   PHYSICAL REVIEW LETTERS

A minimal view of single-particle imaging with X-ray lasers

(2014) N. D. Loh   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight

(2012) N. D. Loh et al.   NATURE

The Coherent X-ray Imaging Data Bank

(2012) Filipe R N C Maia   NATURE METHODS

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Femtosecond X-ray protein nanocrystallography

(2011) Henry N. Chapman et al.   NATURE

Single mimivirus particles intercepted and imaged with an X-ray laser

(2011) M. Marvin Seibert et al.   NATURE

Hawk: the image reconstruction package for coherent X-ray diffractive imaging

(2010) Filipe R. N. C. Maia et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Femtosecond electronic response of atoms to ultra-intense X-rays

(2010) L. Young et al.   NATURE

First lasing and operation of an ångstrom-wavelength free-electron laser

(2010) P. Emma et al.   Nature Photonics

Biomolecular imaging and electronic damage using X-ray free-electron lasers

(2010) Harry M. Quiney et al.   Nature Physics

Structural variability and the incoherent addition of scattered intensities in single-particle diffraction

(2009) Filipe R. N. C. Maia et al.   PHYSICAL REVIEW E

Reconstruction algorithm for single-particle diffraction imaging experiments

(2009) Ne-Te Duane Loh et al.   PHYSICAL REVIEW E

Feasibility of imaging living cells at subnanometer resolutions by ultrafast X-ray diffraction

(2008) Magnus Bergh et al.   QUARTERLY REVIEWS OF BIOPHYSICS