Sequencing and characterization of leaf transcriptomes of six diploid Nicotiana species

Tobacco NUP1 transports both tobacco alkaloids and vitamin B6

(2015) Keita Kato et al.   PHYTOCHEMISTRY

Identification of expressed resistance gene analog sequences in coconut leaf transcriptome and their evolutionary analysis

(2015) Muliyar Krishna RAJESH et al.   Turkish Journal of Agriculture and Forestry

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Divergent and Conserved Elements Comprise the Chemoreceptive Repertoire of the Nonblood-Feeding Mosquito Toxorhynchites amboinensis

(2014) Xiaofan Zhou et al.   Genome Biology and Evolution

Mining whole genomes and transcriptomes of Jatropha (Jatropha curcas) and Castor bean (Ricinus communis) for NBS-LRR genes and defense response associated transcription factors

(2014) Archit Sood et al.   MOLECULAR BIOLOGY REPORTS

Alkaloid transporters in plants

(2014) Nobukazu Shitan et al.   Plant Biotechnology

Combining Transcriptome Assemblies from Multiple De Novo Assemblers in the Allo-Tetraploid Plant Nicotiana benthamiana

(2014) Kenlee Nakasugi et al.   PLoS One

Involvement of the Leaf-Specific Multidrug and Toxic Compound Extrusion (MATE) Transporter Nt-JAT2 in Vacuolar Sequestration of Nicotine in Nicotiana tabacum

(2014) Nobukazu Shitan et al.   PLoS One

The tobacco genome sequence and its comparison with those of tomato and potato

(2014) Nicolas Sierro et al.   Nature Communications

MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity

(2013) Wen Huang et al.   BMC BIOINFORMATICS

Plant bZIP Transcription Factors Responsive to Pathogens: A Review

(2013) Murilo Alves et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamiana

(2013) Kenlee Nakasugi et al.   PLoS One

Systematic Analysis and Comparison of Nucleotide-Binding Site Disease Resistance Genes in a Diploid Cotton Gossypium raimondii

(2013) Hengling Wei et al.   PLoS One

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis

(2012) Amit Katiyar et al.   BMC GENOMICS

Identification of expressed resistance gene-like sequences by data mining in 454-derived transcriptomic sequences of common bean (Phaseolus vulgaris L.)

(2012) Zhanji Liu et al.   BMC PLANT BIOLOGY

A Draft Genome Sequence of Nicotiana benthamiana to Enhance Molecular Plant-Microbe Biology Research

(2012) Aureliano Bombarely et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants

(2012) Walter Sanseverino et al.   NUCLEIC ACIDS RESEARCH

In silico identification of coffee genome expressed sequences potentially associated with resistance to diseases

(2011) Samuel Mazzinghy Alvarenga et al.   GENETICS AND MOLECULAR BIOLOGY

De novo transcriptome sequencing in Salvia miltiorrhiza to identify genes involved in the biosynthesis of active ingredients

(2011) Hua Wenping et al.   GENOMICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Tobacco nicotine uptake permease (NUP1) affects alkaloid metabolism

(2011) S. B. Hildreth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Role of WRKY Transcription Factors in Plant Immunity

(2009) S. P. Pandey et al.   PLANT PHYSIOLOGY

Vacuolar transport of nicotine is mediated by a multidrug and toxic compound extrusion (MATE) transporter in Nicotiana tabacum

(2009) M. Morita et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular diversity in the genus Nicotiana as revealed by randomly amplified polymorphic DNA

(2009) K. Siva Raju et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Multidrug and Toxic Compound Extrusion-Type Transporters Implicated in Vacuolar Sequestration of Nicotine in Tobacco Roots

(2008) T. Shoji et al.   PLANT PHYSIOLOGY