Genome-Enabled Prediction Models for Yield Related Traits in Chickpea

Draft genome sequence ofCicer reticulatumL., the wild progenitor of chickpea provides a resource for agronomic trait improvement

(2016) Sonal Gupta et al.   DNA RESEARCH

Genetic diversity and trait genomic prediction in a pea diversity panel

(2015) Judith Burstin et al.   BMC GENOMICS

Quantitative Trait Loci Mapping and Molecular Breeding for Developing Stress Resilient Maize for Sub-Saharan Africa

(2015) Kassa Semagn et al.   CROP SCIENCE

Genetic Gains in Grain Yield Through Genomic Selection in Eight Bi-parental Maize Populations under Drought Stress

(2015) Yoseph Beyene et al.   CROP SCIENCE

Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.)

(2015) Sandip M Kale et al.   Scientific Reports

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

The Impact of Genetic Relationship and Linkage Disequilibrium on Genomic Selection

(2015) Hongjun Liu et al.   PLoS One

Translational Genomics in Agriculture: Some Examples in Grain Legumes

(2014) Rajeev K. Varshney et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Bridging the gap between marker-assisted and genomic selection of heading time and plant height in hybrid wheat

(2014) Y Zhao et al.   HEREDITY

Genotyping-by-sequencing based intra-specific genetic map refines a ‘‘QTL-hotspot” region for drought tolerance in chickpea

(2014) Deepa Jaganathan et al.   MOLECULAR GENETICS AND GENOMICS

A chromosomal genomics approach to assess and validate thedesiandkabulidraft chickpea genome assemblies

(2014) Pradeep Ruperao et al.   PLANT BIOTECHNOLOGY JOURNAL

Improving the Accuracy of Whole Genome Prediction for Complex Traits Using the Results of Genome Wide Association Studies

(2014) Zhe Zhang et al.   PLoS One

Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches

(2014) Mahendar Thudi et al.   PLoS One

Predicting hybrid performance in rice using genomic best linear unbiased prediction

(2014) S. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Marker-Assisted Backcrossing to Introgress Resistance to Fusarium Wilt Race 1 and Ascochyta Blight in C 214, an Elite Cultivar of Chickpea

(2014) R. K. Varshney et al.   Plant Genome

Harvesting the Promising Fruits of Genomics: Applying Genome Sequencing Technologies to Crop Breeding

(2014) Rajeev K. Varshney et al.   PLOS BIOLOGY

Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers

(2014) Manish Roorkiwal et al.   Frontiers in Plant Science

The use of unbalanced historical data for genomic selection in an international wheat breeding program

(2013) Julie C. Dawson et al.   FIELD CROPS RESEARCH

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

(2013) Rajeev K Varshney et al.   NATURE BIOTECHNOLOGY

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)

(2013) Mukesh Jain et al.   PLANT JOURNAL

Genetic dissection of drought tolerance in chickpea (Cicer arietinum L.)

(2013) Rajeev K. Varshney et al.   THEORETICAL AND APPLIED GENETICS

Single Nucleotide Polymorphism Genotyping for Breeding and Genetics Applications in Chickpea and Pigeonpea using the BeadXpress Platform

(2013) Manish Roorkiwal et al.   Plant Genome

Will genomic selection be a practical method for plant breeding?

(2012) Akihiro Nakaya et al.   ANNALS OF BOTANY

Genomewide Selection versus Marker-assisted Recurrent Selection to Improve Grain Yield and Stover-quality Traits for Cellulosic Ethanol in Maize

(2012) Jon M. Massman et al.   CROP SCIENCE

Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies

(2012) Rajeev K Varshney et al.   JOURNAL OF BIOSCIENCES

Can genomics boost productivity of orphan crops?

(2012) Rajeev K Varshney et al.   NATURE BIOTECHNOLOGY

Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes

(2012) Pavana J. Hiremath et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-enabled prediction of genetic values using radial basis function neural networks

(2012) J. M. González-Camacho et al.   THEORETICAL AND APPLIED GENETICS

Effectiveness of Genomic Prediction of Maize Hybrid Performance in Different Breeding Populations and Environments

(2012) Vanessa S. Windhausen et al.   G3-Genes Genomes Genetics

Evaluation of Genomic Prediction Methods for Fusarium Head Blight Resistance in Wheat

(2012) Jessica Rutkoski et al.   Plant Genome

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

Extension of the bayesian alphabet for genomic selection

(2011) David Habier et al.   BMC BIOINFORMATICS

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Accuracy of Genomic Selection Prediction in Barley Breeding Programs: A Simulation Study Based On the Real Single Nucleotide Polymorphism Data of Barley Breeding Lines

(2011) Hiroyoshi Iwata et al.   CROP SCIENCE

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

Genomic selection in livestock populations

(2011) MICHAEL E. GODDARD et al.   Genetics Research

Accuracy of genomic breeding values for residual feed intake in crossbred beef cattle1

(2011) F. D. N. Mujibi et al.   JOURNAL OF ANIMAL SCIENCE

Reliability of direct genomic values for animals with different relationships within and to the reference population

(2011) M. Pszczola et al.   JOURNAL OF DAIRY SCIENCE

Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.)

(2011) Mahendar Thudi et al.   PLoS One

Genomic Selection Accuracy using Multifamily Prediction Models in a Wheat Breeding Program

(2011) Elliot L. Heffner et al.   Plant Genome

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Semi-parametric genomic-enabled prediction of genetic values using reproducing kernel Hilbert spaces methods

(2010) GUSTAVO DE LOS CAMPOS et al.   Genetics Research

Predicting Quantitative Traits With Regression Models for Dense Molecular Markers and Pedigree

(2009) G. de los Campos et al.   GENETICS

Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea)

(2008) Luu M Cuc et al.   BMC PLANT BIOLOGY

Accuracy of Predicting the Genetic Risk of Disease Using a Genome-Wide Approach

(2008) Hans D. Daetwyler et al.   PLoS One

The impact of genetic relationship information on genome-assisted breeding values

(2007) D. Habier et al.   GENETICS