“Omics” Tools for Better Understanding the Plant–Endophyte Interactions
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
“Omics” Tools for Better Understanding the Plant–Endophyte Interactions
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-06-30
DOI
10.3389/fpls.2016.00955
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The genome of Xylona heveae provides a window into fungal endophytism
- (2016) Romina Gazis et al. Fungal Biology
- Genomic investigation reveals evolution and lifestyle adaptation of endophytic Staphylococcus epidermidis
- (2016) Vasvi Chaudhry et al. Scientific Reports
- Genomic and transcriptomic analysis of the endophytic fungus Pestalotiopsis fici reveals its lifestyle and high potential for synthesis of natural products
- (2015) Xiuna Wang et al. BMC GENOMICS
- A host plant genome (Zizania latifolia) after a century-long endophyte infection
- (2015) Longbiao Guo et al. PLANT JOURNAL
- Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E
- (2015) Li Lin et al. Standards in Genomic Sciences
- Complete genome sequence of Pseudomonas fluorescens strain PICF7, an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae
- (2015) Pedro Martínez-García et al. Standards in Genomic Sciences
- A Legume Genetic Framework Controls Infection of Nodules by Symbiotic and Endophytic Bacteria
- (2015) Rafal Zgadzaj et al. PLoS Genetics
- Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1
- (2015) Andrea Firrincieli et al. Frontiers in Microbiology
- Whole-genome comparative analysis of virulence genes unveils similarities and differences between endophytes and other symbiotic bacteria
- (2015) Sebastià n Lòpez-Fernà ndez et al. Frontiers in Microbiology
- The genomes of closely related Pantoea ananatis maize seed endophytes having different effects on the host plant differ in secretion system genes and mobile genetic elements
- (2015) Raheleh Sheibani-Tezerji et al. Frontiers in Microbiology
- The bacterial proteogenomic pipeline
- (2014) Julian Uszkoreit et al. BMC GENOMICS
- Genome sequencing and analysis of the paclitaxel-producing endophytic fungus Penicillium aurantiogriseum NRRL 62431
- (2014) Yanfang Yang et al. BMC GENOMICS
- Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts
- (2014) Pieter De Maayer et al. BMC GENOMICS
- Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes
- (2014) Doumit Camilios-Neto et al. BMC GENOMICS
- Biotechnological potential of plant-associated endophytic fungi: hope versus hype
- (2014) Souvik Kusari et al. TRENDS IN BIOTECHNOLOGY
- The rice endophyte Harpophora oryzae genome reveals evolution from a pathogen to a mutualistic endophyte
- (2014) Xi-Hui Xu et al. Scientific Reports
- Complete genome of the switchgrass endophyte Enterobacter clocace P101
- (2014) Jodi L. Humann et al. Standards in Genomic Sciences
- Metaproteomics: Harnessing the Power of High Performance Mass Spectrometry to Identify the Suite of Proteins That Control Metabolic Activities in Microbial Communities
- (2013) Robert L. Hettich et al. ANALYTICAL CHEMISTRY
- Endophyte research: going beyond isolation and metabolite documentation
- (2013) Trichur S. Suryanarayanan Fungal Ecology
- Community composition of root-associated fungi in aQuercus-dominated temperate forest: “codominance” of mycorrhizal and root-endophytic fungi
- (2013) Hirokazu Toju et al. Ecology and Evolution
- Plant-Symbiotic Fungi as Chemical Engineers: Multi-Genome Analysis of the Clavicipitaceae Reveals Dynamics of Alkaloid Loci
- (2013) Christopher L. Schardl et al. PLoS Genetics
- The genome of the endophytic bacterium H. frisingense GSF30T identifies diverse strategies in the Herbaspirillum genus to interact with plants
- (2013) Daniel Straub et al. Frontiers in Microbiology
- The Diversity of Anti-Microbial Secondary Metabolites Produced by Fungal Endophytes: An Interdisciplinary Perspective
- (2013) Walaa Kamel Mousa et al. Frontiers in Microbiology
- Genomic comparison of the endophyte Herbaspirillum seropedicaeSmR1 and the phytopathogen Herbaspirillum rubrisubalbicansM1 by suppressive subtractive hybridization and partial genome sequencing
- (2012) Rose A. Monteiro et al. FEMS MICROBIOLOGY ECOLOGY
- Metatranscriptomic analysis of small RNAs present in soybean deep sequencing libraries
- (2012) Lorrayne Gomes Molina et al. GENETICS AND MOLECULAR BIOLOGY
- Genome Sequence of Stenotrophomonas maltophilia RR-10, Isolated as an Endophyte from Rice Root
- (2012) B. Zhu et al. JOURNAL OF BACTERIOLOGY
- Complete Genome Sequence of the Endophytic Bacterium Burkholderia sp. Strain KJ006
- (2012) M.-J. Kwak et al. JOURNAL OF BACTERIOLOGY
- Genome Sequence of Enterobacter radicincitans DSM16656T, a Plant Growth-Promoting Endophyte
- (2012) K. Witzel et al. JOURNAL OF BACTERIOLOGY
- Complete Genome Sequence of the Endophytic Enterobacter cloacae subsp. cloacae Strain ENHKU01
- (2012) W.-Y. Liu et al. JOURNAL OF BACTERIOLOGY
- Whole-Genome Sequence of Enterobacter sp. Strain SST3, an Endophyte Isolated from Jamaican Sugarcane (Saccharum sp.) Stalk Tissue
- (2012) H. M. Gan et al. JOURNAL OF BACTERIOLOGY
- Endophytic fungi from medicinal plants: a treasure hunt for bioactive metabolites
- (2012) Sanjana Kaul et al. PHYTOCHEMISTRY REVIEWS
- SOLiD-SAGE of Endophyte-Infected Red Fescue Reveals Numerous Effects on Host Transcriptome and an Abundance of Highly Expressed Fungal Secreted Proteins
- (2012) Karen V. Ambrose et al. PLoS One
- Genomic Analysis of the Hydrocarbon-Producing, Cellulolytic, Endophytic Fungus Ascocoryne sarcoides
- (2012) Tara A. Gianoulis et al. PLoS Genetics
- Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice
- (2011) Claudia Knief et al. ISME Journal
- Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
- (2011) A. Weilharter et al. JOURNAL OF BACTERIOLOGY
- Complete Genome Sequence of Bacillus subtilis BSn5, an Endophytic Bacterium of Amorphophallus konjac with Antimicrobial Activity for the Plant Pathogen Erwinia carotovora subsp. carotovora
- (2011) Y. Deng et al. JOURNAL OF BACTERIOLOGY
- Piriformospora indica-a mutualistic basidiomycete with an exceptionally large plant host range
- (2011) XIAOYU QIANG et al. MOLECULAR PLANT PATHOLOGY
- Functional Characteristics of an Endophyte Community Colonizing Rice Roots as Revealed by Metagenomic Analysis
- (2011) A. Sessitsch et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Sebacinales Everywhere: Previously Overlooked Ubiquitous Fungal Endophytes
- (2011) Michael Weiß et al. PLoS One
- Genome of Herbaspirillum seropedicae Strain SmR1, a Specialized Diazotrophic Endophyte of Tropical Grasses
- (2011) Fábio O. Pedrosa et al. PLoS Genetics
- Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica
- (2011) Alga Zuccaro et al. PLoS Pathogens
- Complete Genomic Structure of the Cultivated Rice Endophyte Azospirillum sp. B510
- (2010) T. Kaneko et al. DNA RESEARCH
- Complete Genome Sequence of the Metabolically Versatile Plant Growth-Promoting Endophyte Variovorax paradoxus S110
- (2010) J.-I. Han et al. JOURNAL OF BACTERIOLOGY
- Microarray analysis of endophyte-infected and endophyte-free tall fescue
- (2010) Randy D. Dinkins et al. JOURNAL OF PLANT PHYSIOLOGY
- Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites
- (2010) ARI JUMPPONEN et al. MOLECULAR ECOLOGY
- Quantitative Proteomic Analysis of the Interaction Between the Endophytic Plant-Growth-Promoting BacteriumGluconacetobacter diazotrophicusand Sugarcane
- (2010) Letícia M. S. Lery et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Genome Sequence of the Plant Growth Promoting Endophytic Bacterium Enterobacter sp. 638
- (2010) Safiyh Taghavi et al. PLoS Genetics
- Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5
- (2009) Marcelo Bertalan et al. BMC GENOMICS
- High-Throughput Sequencing and Metagenomics
- (2009) William J. Jones Estuaries and Coasts
- Community proteogenomics reveals insights into the physiology of phyllosphere bacteria
- (2009) N. Delmotte et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Advantages and limitations of next-generation sequencing technologies: A comparison of electrophoresis and non-electrophoresis methods
- (2008) Daniel G. Hert et al. ELECTROPHORESIS
- Stress tolerance in plants via habitat-adapted symbiosis
- (2008) Rusty J Rodriguez et al. ISME Journal
- Functional metagenomic profiling of nine biomes
- (2008) Elizabeth A. Dinsdale et al. NATURE
- Complete Genome Sequence of the N2-Fixing Broad Host Range Endophyte Klebsiella pneumoniae 342 and Virulence Predictions Verified in Mice
- (2008) Derrick E. Fouts et al. PLoS Genetics
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More