SOLiD-SAGE of Endophyte-Infected Red Fescue Reveals Numerous Effects on Host Transcriptome and an Abundance of Highly Expressed Fungal Secreted Proteins

Fungal endophytes of grasses

(2012) Aiko Tanaka et al.   CURRENT OPINION IN PLANT BIOLOGY

Taxonomic placement of Epichloë poae sp. nov. and horizontal dissemination to seedlings via conidia

(2012) Mariusz Tadych et al.   FUNGAL DIVERSITY

Endophytic mediation of reactive oxygen species and antioxidant activity in plants: a review

(2012) Cyd E. Hamilton et al.   FUNGAL DIVERSITY

Chromatin replication and epigenome maintenance

(2012) Constance Alabert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Grass-endophyte interactions: a note on the role of monosaccharide transport in the Neotyphodium lolii-Lolium perenne symbiosis

(2012) Susanne Rasmussen et al.   NEW PHYTOLOGIST

An Epichloë endophyte affects the competitive ability of Festuca rubra against other grassland species

(2012) Beatriz R. Vázquez-de-Aldana et al.   PLANT AND SOIL

Effector-Mediated Suppression of Chitin-Triggered Immunity by Magnaporthe oryzae Is Necessary for Rice Blast Disease

(2012) T. A. Mentlak et al.   PLANT CELL

Reactive Oxygen Species in Phytopathogenic Fungi: Signaling, Development, and Disease

(2011) Jens Heller et al.   Annual Review of Phytopathology

B2G-FAR, a species-centered GO annotation repository

(2011) Stefan Götz et al.   BIOINFORMATICS

Horizontal gene transfer in fungi

(2011) David A. Fitzpatrick   FEMS MICROBIOLOGY LETTERS

Chemotypic diversity of epichloae, fungal symbionts of grasses

(2011) Christopher L. Schardl et al.   Fungal Ecology

Digital gene expression for non-model organisms

(2011) L. Z. Hong et al.   GENOME RESEARCH

Hexose Transporters of a Hemibiotrophic Plant Pathogen

(2011) Ulrike Lingner et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cysteine-Rich Peptides (CRPs) mediate diverse aspects of cell-cell communication in plant reproduction and development

(2011) E. Marshall et al.   JOURNAL OF EXPERIMENTAL BOTANY

High Levels of a Fungal Superoxide Dismutase and Increased Concentration of a PR-10 Plant Protein in Associations Between the Endophytic Fungus Neotyphodium lolii and Ryegrass

(2011) Ningxin Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Analysis of Two in Planta Expressed LysM Effector Homologs from the Fungus Mycosphaerella graminicola Reveals Novel Functional Properties and Varying Contributions to Virulence on Wheat

(2011) R. Marshall et al.   PLANT PHYSIOLOGY

Differential Gene Expression in the Siphonophore Nanomia bijuga (Cnidaria) Assessed with Multiple Next-Generation Sequencing Workflows

(2011) Stefan Siebert et al.   PLoS One

Hemicelluloses

(2010) Henrik Vibe Scheller et al.   Annual Review of Plant Biology

What are natural antisense transcripts good for?

(2010) Andreas Werner et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

The KP4 killer protein gene family

(2010) Daren W. Brown   CURRENT GENETICS

Costars, a Dictyostelium protein similar to the C-terminal domain of STARS, regulates the actin cytoskeleton and motility

(2010) T.-L. Pang et al.   JOURNAL OF CELL SCIENCE

Microarray analysis of endophyte-infected and endophyte-free tall fescue

(2010) Randy D. Dinkins et al.   JOURNAL OF PLANT PHYSIOLOGY

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Disruption of Signaling in a Fungal-Grass Symbiosis Leads to Pathogenesis

(2010) C. J. Eaton et al.   PLANT PHYSIOLOGY

High-Throughput SuperSAGE for Digital Gene Expression Analysis of Multiple Samples Using Next Generation Sequencing

(2010) Hideo Matsumura et al.   PLoS One

Conserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants

(2010) R. de Jonge et al.   SCIENCE

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

QuickGO: a web-based tool for Gene Ontology searching

(2009) D. Binns et al.   BIOINFORMATICS

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

(2009) Ryan Lister et al.   CURRENT OPINION IN PLANT BIOLOGY

Regulatory roles of natural antisense transcripts

(2009) Mohammad Ali Faghihi et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

ROS in biotic interactions

(2009) Miguel Angel Torres   PHYSIOLOGIA PLANTARUM

Is plant endophyte-mediated defensive mutualism the result of oxidative stress protection?

(2009) James F. White et al.   PHYSIOLOGIA PLANTARUM

Malate. Jack of all trades or master of a few?

(2009) Alisdair R. Fernie et al.   PHYTOCHEMISTRY

Metabolomics analysis of the Lolium perenne–Neotyphodium lolii symbiosis: more than just alkaloids?

(2009) Susanne Rasmussen et al.   PHYTOCHEMISTRY REVIEWS

Regulation of a Chemical Defense against Herbivory Produced by Symbiotic Fungi in Grass Plants

(2009) D.-X. Zhang et al.   PLANT PHYSIOLOGY

Intra- and extra-cellular excretion of carboxylates

(2009) Stefan Meyer et al.   TRENDS IN PLANT SCIENCE

Molecular Analysis of Maltotriose Active Transport and Fermentation by Saccharomyces cerevisiae Reveals a Determinant Role for the AGT1 Permease

(2008) S. L. Alves et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Clavicipitaceous endophytes: Their ability to enhance resistance of grasses to multiple stresses

(2008) G. Kuldau et al.   BIOLOGICAL CONTROL

Comparing the xylose reductase/xylitol dehydrogenase and xylose isomerase pathways in arabinose and xylose fermenting Saccharomyces cerevisiae strains

(2008) Maurizio Bettiga et al.   Biotechnology for Biofuels

Analysis of wheat SAGE tags reveals evidence for widespread antisense transcription

(2008) Rebecca L Poole et al.   BMC GENOMICS

Role of reactive oxygen species in fungal cellular differentiations

(2008) Barry Scott et al.   CURRENT OPINION IN MICROBIOLOGY

NoxA activation by the small GTPase RacA is required to maintain a mutualistic symbiotic association between Epichloë festucae and perennial ryegrass

(2008) Aiko Tanaka et al.   MOLECULAR MICROBIOLOGY

Horizontal gene transfer in eukaryotic evolution

(2008) Patrick J. Keeling et al.   NATURE REVIEWS GENETICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Metabolic Profiles of Lolium perenne Are Differentially Affected by Nitrogen Supply, Carbohydrate Content, and Fungal Endophyte Infection

(2008) S. Rasmussen et al.   PLANT PHYSIOLOGY

Comparative Genome Analysis of Filamentous Fungi Reveals Gene Family Expansions Associated with Fungal Pathogenesis

(2008) Darren M. Soanes et al.   PLoS One

Assessing the Performance of Single-Copy Genes for Recovering Robust Phylogenies

(2008) G. Aguileta et al.   SYSTEMATIC BIOLOGY

Epichloë endophytes grow by intercalary hyphal extension in elongating grass leaves

(2007) Michael J. Christensen et al.   FUNGAL GENETICS AND BIOLOGY

Biological and physiological characteristics of Neotyphodium gansuense symbiotic with Achnatherum inebrians

(2006) Chunjie Li et al.   MICROBIOLOGICAL RESEARCH