Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-07-19
DOI
10.3389/fpls.2016.01044
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean
- (2016) Gunvant Patil et al. Scientific Reports
- Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis
- (2015) Gunvant Patil et al. BMC GENOMICS
- Core clock,SUB1, andABARgenes mediate flooding and drought responses via alternative splicing in soybean
- (2015) Naeem H. Syed et al. JOURNAL OF EXPERIMENTAL BOTANY
- Characterization of proteins in soybean roots under flooding and drought stresses
- (2015) MyeongWon Oh et al. Journal of Proteomics
- A Sweetpotato Geranylgeranyl Pyrophosphate Synthase Gene, IbGGPS, Increases Carotenoid Content and Enhances Osmotic Stress Tolerance in Arabidopsis thaliana
- (2015) Wei Chen et al. PLoS One
- Glycolytic Enzyme Activities and Gene Expression in Cicer arietinum Exposed to Water-Deficit Stress
- (2014) Suruchi M. Khanna et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- Mechanism of ABA signal transduction: Agricultural highlights for improving drought tolerance
- (2014) Tae-Houn Kim JOURNAL OF PLANT BIOLOGY
- Global gene expression responses to waterlogging in leaves of rape seedlings
- (2014) Yong-Hwa Lee et al. PLANT CELL REPORTS
- Integrating omic approaches for abiotic stress tolerance in soybean
- (2014) Rupesh Deshmukh et al. Frontiers in Plant Science
- Myo-inositol oxygenase is important for the removal of excess myo-inositol from syncytia induced byHeterodera schachtiiin Arabidopsis roots
- (2013) Shahid Siddique et al. NEW PHYTOLOGIST
- PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors
- (2013) Jinpu Jin et al. NUCLEIC ACIDS RESEARCH
- Identification of two additional members of the tRNA isopentenyltransferase family in Physcomitrella patens
- (2013) Gunvant Patil et al. PLANT MOLECULAR BIOLOGY
- Identification of Cytokinin-Responsive Genes Using Microarray Meta-Analysis and RNA-Seq in Arabidopsis
- (2013) A. Bhargava et al. PLANT PHYSIOLOGY
- Genomic Regions Flanking E-Box Binding Sites Influence DNA Binding Specificity of bHLH Transcription Factors through DNA Shape
- (2013) Raluca Gordân et al. Cell Reports
- Reactive oxygen species mediate growth and death in submerged plants
- (2013) Bianka Steffens et al. Frontiers in Plant Science
- Source-to-sink transport of sugar and regulation by environmental factors
- (2013) Remi Lemoine et al. Frontiers in Plant Science
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Identification of SNPs in RNA-seq data of two cultivars of Glycine max (soybean) differing in drought resistance
- (2012) Ramon Oliveira Vidal et al. GENETICS AND MOLECULAR BIOLOGY
- Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks
- (2012) J. Krasensky et al. JOURNAL OF EXPERIMENTAL BOTANY
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Waterproofing Crops: Effective Flooding Survival Strategies
- (2012) J. Bailey-Serres et al. PLANT PHYSIOLOGY
- Differential Gene Expression in Soybean Leaf Tissues at Late Developmental Stages under Drought Stress Revealed by Genome-Wide Transcriptome Analysis
- (2012) Dung Tien Le et al. PLoS One
- Waterlogging Tolerance of Crops: Breeding, Mechanism of Tolerance, Molecular Approaches, and Future Prospects
- (2012) F. Ahmed et al. Biomed Research International
- AP2/ERF family transcription factors in plant abiotic stress responses
- (2011) Junya Mizoi et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- NAC transcription factors in plant abiotic stress responses
- (2011) Kazuo Nakashima et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice
- (2011) Di Wang et al. BMC GENOMICS
- Hormone balance and abiotic stress tolerance in crop plants
- (2011) Zvi Peleg et al. CURRENT OPINION IN PLANT BIOLOGY
- Identification of Cis-Acting Promoter Elements in Cold- and Dehydration-Induced Transcriptional Pathways in Arabidopsis, Rice, and Soybean
- (2011) K. Maruyama et al. DNA RESEARCH
- Plants and flooding stress
- (2011) Pierdomenico Perata et al. NEW PHYTOLOGIST
- The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice
- (2011) Takeshi Fukao et al. PLANT CELL
- Soybean NAC transcription factors promote abiotic stress tolerance and lateral root formation in transgenic plants
- (2011) Yu-Jun Hao et al. PLANT JOURNAL
- Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings
- (2011) Yohei Nanjo et al. PLANT MOLECULAR BIOLOGY
- Optimization of bio-diesel production from soybean and wastes of cooked oil: Combining dielectric microwave irradiation and a SrO catalyst
- (2010) Miri Koberg et al. BIORESOURCE TECHNOLOGY
- RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome
- (2010) Andrew J Severin et al. BMC PLANT BIOLOGY
- Disruption of the 1-deoxy-D-xylulose-5-phosphate reductoisomerase (DXR) gene results in albino, dwarf and defects in trichome initiation and stomata closure in Arabidopsis
- (2010) Shufan Xing et al. CELL RESEARCH
- Understanding Oxidative Stress and Antioxidant Functions to Enhance Photosynthesis
- (2010) C. H. Foyer et al. PLANT PHYSIOLOGY
- MYB transcription factors in Arabidopsis
- (2010) Christian Dubos et al. TRENDS IN PLANT SCIENCE
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- cis-Regulatory elements in plant cell signaling
- (2009) Henry D Priest et al. CURRENT OPINION IN PLANT BIOLOGY
- A Comprehensive Analysis of the Soybean Genes and Proteins Expressed under Flooding Stress using Transcriptome and Proteome Techniques
- (2009) Setsuko Komatsu et al. JOURNAL OF PROTEOME RESEARCH
- A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize
- (2009) BJÖRN USADEL et al. PLANT CELL AND ENVIRONMENT
- The Role of Oxophytodienoate Reductases in the Detoxification of the Explosive 2,4,6-Trinitrotoluene by Arabidopsis
- (2009) E. R. Beynon et al. PLANT PHYSIOLOGY
- Abscisic Acid Inhibits Type 2C Protein Phosphatases via the PYR/PYL Family of START Proteins
- (2009) S.-Y. Park et al. SCIENCE
- Diversity and Complexity in DNA Recognition by Transcription Factors
- (2009) G. Badis et al. SCIENCE
- Next-generation sequencing technologies and their implications for crop genetics and breeding
- (2009) Rajeev K. Varshney et al. TRENDS IN BIOTECHNOLOGY
- Identification of new up-regulated genes under drought stress in soybean nodules
- (2008) Mathilde Clement et al. GENE
- Adaptations of higher plant cell walls to water loss: drought vs desiccation
- (2008) John P. Moore et al. PHYSIOLOGIA PLANTARUM
- Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
- (2008) Ingo Ciolkowski et al. PLANT MOLECULAR BIOLOGY
- Differential Response of Gray Poplar Leaves and Roots Underpins Stress Adaptation during Hypoxia
- (2008) J. Kreuzwieser et al. PLANT PHYSIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation