Mineral vs. Organic Amendments: Microbial Community Structure, Activity and Abundance of Agriculturally Relevant Microbes Are Driven by Long-Term Fertilization Strategies

Long-term effects of imbalanced fertilization on the composition and diversity of soil bacterial community

(2016) Jinu Eo et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Shifts in microbial biomass and community composition in subtropical paddy soils under a gradient of manure amendment

(2016) Xiaoyan Ma et al.   BIOLOGY AND FERTILITY OF SOILS

Soil extracellular enzyme activities, soil carbon and nitrogen storage under nitrogen fertilization: A meta-analysis

(2016) Siyang Jian et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in the abundance and structure of bacterial communities under long-term fertilization treatments in a peanut monocropping system

(2015) Wuxing Liu et al.   PLANT AND SOIL

Responses of absolute and specific soil enzyme activities to long term additions of organic and mineral fertilizer

(2015) Xinyu Zhang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Over 150 Years of Long-Term Fertilization Alters Spatial Scaling of Microbial Biodiversity

(2015) Yuting Liang et al.   mBio

Effects of Fertilization and Sampling Time on Composition and Diversity of Entire and Active Bacterial Communities in German Grassland Soils

(2015) Sarah Herzog et al.   PLoS One

Changes in soil microbial community composition in response to fertilization of paddy soils in subtropical China

(2014) Wen-Yi Dong et al.   APPLIED SOIL ECOLOGY

Extracellular enzyme kinetics scale with resource availability

(2014) Robert L. Sinsabaugh et al.   BIOGEOCHEMISTRY

Microbial community dynamics alleviate stoichiometric constraints during litter decay

(2014) Christina Kaiser et al.   ECOLOGY LETTERS

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Effect of long-term different fertilization on bacterial community structures and diversity in citrus orchard soil of volcanic ash

(2014) Jae Ho Joa et al.   JOURNAL OF MICROBIOLOGY

Soil pH Determines Microbial Diversity and Composition in the Park Grass Experiment

(2014) Kateryna Zhalnina et al.   MICROBIAL ECOLOGY

Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach

(2014) Guillaume Lentendu et al.   MOLECULAR ECOLOGY

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Long-term effects of mineral fertilizers on soil microorganisms – A review

(2014) Daniel Geisseler et al.   SOIL BIOLOGY & BIOCHEMISTRY

Rate-specific responses of prokaryotic diversity and structure to nitrogen deposition in the Leymus chinensis steppe

(2014) Minjie Yao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in extracellular enzyme activity and microbial community structure with soil depth at the Luquillo Critical Zone Observatory

(2014) M.M. Stone et al.   SOIL BIOLOGY & BIOCHEMISTRY

Long-term impact of farm management and crops on soil microorganisms assessed by combined DGGE and PLFA analyses

(2014) Fabio Stagnari et al.   Frontiers in Microbiology

Investigating the insecticidal potential of Geomyces (Myxotrichaceae: Helotiales) and Mortierella (Mortierellacea: Mortierellales) isolated from Antarctica

(2014) Steven Edgington et al.   SpringerPlus

Pyrosequencing evidences the impact of cropping on soil bacterial and fungal diversity in Laos tropical grassland

(2013) Pascal Lienhard et al.   Agronomy for Sustainable Development

Microplate-scale fluorometric soil enzyme assays as tools to assess soil quality in a long-term agricultural field experiment

(2013) Caterina Giacometti et al.   APPLIED SOIL ECOLOGY

Influence of long-term fertilisation and crop rotation on changes in fungal and bacterial residues in a tropical rice-field soil

(2013) Rajasekaran Murugan et al.   BIOLOGY AND FERTILITY OF SOILS

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Ascomycota Members Dominate Fungal Communities during Straw Residue Decomposition in Arable Soil

(2013) Anzhou Ma et al.   PLoS One

Comparison of commonly used primer sets for evaluating arbuscular mycorrhizal fungal communities: Is there a universal solution?

(2013) Petr Kohout et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in Fungal Community Composition in Response to Elevated Atmospheric CO2 and Nitrogen Fertilization Varies with Soil Horizon

(2013) Carolyn F. Weber et al.   Frontiers in Microbiology

Chemical and microbiological soil quality indicators and their potential to differentiate fertilization regimes in temperate agroecosystems

(2012) Caterina Giacometti et al.   APPLIED SOIL ECOLOGY

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Short-term effects of organic and inorganic fertilizers on soil microbial community structure and function

(2012) Cristina Lazcano et al.   BIOLOGY AND FERTILITY OF SOILS

Soil enzymology: classical and molecular approaches

(2012) P. Nannipieri et al.   BIOLOGY AND FERTILITY OF SOILS

Long-term effects of soil nutrient deficiency on arbuscular mycorrhizal communities

(2012) Pedro M. Antunes et al.   FUNCTIONAL ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Unravelling Soil Fungal Communities from Different Mediterranean Land-Use Backgrounds

(2012) Alberto Orgiazzi et al.   PLoS One

Pyrosequencing Reveals the Influence of Organic and Conventional Farming Systems on Bacterial Communities

(2012) Ru Li et al.   PLoS One

Differences in Soil Fungal Communities between European Beech (Fagus sylvatica L.) Dominated Forests Are Related to Soil and Understory Vegetation

(2012) Tesfaye Wubet et al.   PLoS One

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Enhanced top soil carbon stocks under organic farming

(2012) A. Gattinger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil enzymes in a changing environment: Current knowledge and future directions

(2012) Richard G. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of mineral and organic fertilization on crop yield, nitrogen uptake, carbon and nitrogen balances, as well as soil organic carbon content and dynamics: results from 20 European long-term field experiments of the twenty-first century

(2012) Martin Körschens et al.   Archives of Agronomy and Soil Science

Long-term fertilization effects on crop yields, soil fertility and sustainability in the Static Fertilization Experiment Bad Lauchstädt under climatic conditions 2001–2010

(2012) Ines Merbach et al.   Archives of Agronomy and Soil Science

Soil Microbial Response to Nitrogen Rate and Placement and Barley Seeding Rate under No Till

(2011) Newton Z. Lupwayi et al.   AGRONOMY JOURNAL

Community Structures of Fecal Bacteria in Cattle from Different Animal Feeding Operations

(2011) Orin C. Shanks et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Environmental Impact of Different Agricultural Management Practices: Conventional vs. Organic Agriculture

(2011) Tiziano Gomiero et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Fungal and bacterial growth responses to N fertilization and pH in the 150-year ‘Park Grass’ UK grassland experiment

(2011) Johannes Rousk et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Nitrogen inputs accelerate phosphorus cycling rates across a wide variety of terrestrial ecosystems

(2011) Alison R. Marklein et al.   NEW PHYTOLOGIST

Effects of 15 years of manure and inorganic fertilizers on soil organic carbon fractions in a wheat-maize system in the North China Plain

(2011) Qiong Liang et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Optimization of hydrolytic and oxidative enzyme methods for ecosystem studies

(2011) Donovan P. German et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparisons of Soil Microbial Communities Influenced by Soil Texture, Nitrogen Fertility, and Rotations

(2011) Bruce A. Roberts et al.   SOIL SCIENCE

Effects of fertilization and soil management on crop yields and carbon stabilization in soils. A review

(2010) B. Ludwig et al.   Agronomy for Sustainable Development

Effect of long-term fertilizers and manure application on microbial biomass and microbial activity of a tropical agricultural soil

(2010) Amrita Chakraborty et al.   BIOLOGY AND FERTILITY OF SOILS

Short-term incorporation of organic manures and biofertilizers influences biochemical and microbial characteristics of soils under an annual crop [Turmeric (Curcuma longa L.)]

(2010) R. Dinesh et al.   BIORESOURCE TECHNOLOGY

Isolation and characterization of antagonistic fungi against potato scab pathogens from potato field soils

(2010) Masahiro Tagawa et al.   FEMS MICROBIOLOGY LETTERS

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

DNA barcoding of arbuscular mycorrhizal fungi

(2010) Herbert Stockinger et al.   NEW PHYTOLOGIST

Responses of soil microbial biomass and enzymatic activities to fertilizations of mixed inorganic and organic nitrogen at a subtropical forest in East China

(2010) Peng Guo et al.   PLANT AND SOIL

Nitrogen in Agriculture: Balancing the Cost of an Essential Resource

(2009) G. Philip Robertson et al.   Annual Review of Environment and Resources

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The ecology of the Zygomycetes and its impact on environmental exposure

(2009) M. Richardson   CLINICAL MICROBIOLOGY AND INFECTION

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Chitinase genes revealed and compared in bacterial isolates, DNA extracts and a metagenomic library from a phytopathogen-suppressive soil

(2009) Karin Hjort et al.   FEMS MICROBIOLOGY ECOLOGY

Biological weathering and the long-term carbon cycle: integrating mycorrhizal evolution and function into the current paradigm

(2009) L. L. TAYLOR et al.   Geobiology

Friends and foes: streptomycetes as modulators of plant disease and symbiosis

(2008) Silvia D. Schrey et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Soil biochemical indicators as a tool to assess the short-term impact of agricultural management on changes in organic C in a Mediterranean environment

(2008) A. Lagomarsino et al.   ECOLOGICAL INDICATORS

Influence of continuous application of inorganic nutrients to a Maize–Wheat rotation on soil enzyme activity and grain quality in a rainfed Indian soil

(2008) Supradip Saha et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Environmental and anthropogenic controls over bacterial communities in wetland soils

(2008) W. H. Hartman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Short- and medium-term contrasting effects of nitrogen fertilization on C and N cycling in a poplar plantation soil

(2007) M.C. Moscatelli et al.   FOREST ECOLOGY AND MANAGEMENT