Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China

Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

(2016) Emily B. Graham et al.   Frontiers in Microbiology

Rare taxa have potential to make metabolic contributions in enhanced biological phosphorus removal ecosystems

(2015) Christopher E. Lawson et al.   ENVIRONMENTAL MICROBIOLOGY

Environmental rather than spatial factors structure bacterioplankton communities in shallow lakes along a > 6000 km latitudinal gradient in South America

(2015) Caroline Souffreau et al.   ENVIRONMENTAL MICROBIOLOGY

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Continental-scale distributions of dust-associated bacteria and fungi

(2015) Albert Barberán et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Latitudinal Distribution of Ammonia-Oxidizing Bacteria and Archaea in the Agricultural Soils of Eastern China

(2014) Hongchen Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Correlating Microbial Diversity Patterns with Geochemistry in an Extreme and Heterogeneous Environment of Mine Tailings

(2014) Jun Liu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Patterns of Rare and Abundant Marine Microbial Eukaryotes

(2014) Ramiro Logares et al.   CURRENT BIOLOGY

Microbial diversity and biogeochemical cycling in soda lakes

(2014) Dimitry Y. Sorokin et al.   EXTREMOPHILES

The niche of an invasive marine microbe in a subtropical freshwater impoundment

(2014) K David Hambright et al.   ISME Journal

Do we need to understand microbial communities to predict ecosystem function? A comparison of statistical models of nitrogen cycling processes

(2013) Emily B. Graham et al.   SOIL BIOLOGY & BIOCHEMISTRY

amoA-encoding archaea and thaumarchaeol in the lakes on the northeastern Qinghai-Tibetan Plateau, China

(2013) Jian Yang et al.   Frontiers in Microbiology

Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau

(2012) Jinbo Xiong et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

The Rare Bacterial Biosphere

(2011) Carlos Pedrós-Alió   Annual Review of Marine Science

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Bacterial community structure in a latitudinal gradient of lakes: the roles of spatial versus environmental factors

(2011) M. ROMINA SCHIAFFINO et al.   FRESHWATER BIOLOGY

Modelling the effect of size on the aerial dispersal of microorganisms

(2011) David M. Wilkinson et al.   JOURNAL OF BIOGEOGRAPHY

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform

(2011) Hideyuki Tamaki et al.   PLoS One

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

A review of molecular methods to study the microbiota of soil and the mycosphere

(2010) J.D. van Elsas et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland

(2010) Michael Pester et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Microbial Biogeography of Six Salt Lakes in Inner Mongolia, China, and a Salt Lake in Argentina

(2009) E. Pagaling et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial diversity of water and sediment in the Changjiang estuary and coastal area of the East China Sea

(2009) Bi-Wei Feng et al.   FEMS MICROBIOLOGY ECOLOGY

Ecology of the rare microbial biosphere of the Arctic Ocean

(2009) Pierre E. Galand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA