A novel ciprofloxacin-resistant subclade of H58 Salmonella Typhi is associated with fluoroquinolone treatment failure

Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial

(2016) Amit Arjyal et al.   LANCET INFECTIOUS DISEASES

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

(2015) Vanessa K Wong et al.   NATURE GENETICS

Antimicrobial resistance and management of invasive Salmonella disease

(2015) Samuel Kariuki et al.   VACCINE

Emergence of Ciprofloxacin-Resistant Salmonella enterica Serovar Typhi in Italy

(2015) Aurora García-Fernández et al.   PLoS One

Genomic Dissection of Travel-Associated Extended-Spectrum-Beta-Lactamase-Producing Salmonella enterica Serovar Typhi Isolates Originating from the Philippines: a One-Off Occurrence or a Threat to Effective Treatment of Typhoid Fever?

(2014) Rene S. Hendriksen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

First isolation of ciprofloxacin-resistant Salmonella enterica serovar Typhi in Taiwan

(2013) Chia-Jie Lee et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

Gatifloxacin Versus Ofloxacin for the Treatment of Uncomplicated Enteric Fever in Nepal: An Open-Label, Randomized, Controlled Trial

(2013) Samir Koirala et al.   PLoS Neglected Tropical Diseases

Differential Epidemiology of Salmonella Typhi and Paratyphi A in Kathmandu, Nepal: A Matched Case Control Investigation in a Highly Endemic Enteric Fever Setting

(2013) Abhilasha Karkey et al.   PLoS Neglected Tropical Diseases

Fitness benefits in fluoroquinolone-resistant Salmonella Typhi in the absence of antimicrobial pressure

(2013) Stephen Baker et al.   eLife

Highly Resistant Salmonella enterica Serovar Typhi with a NovelgyrAMutation Raises Questions about the Long-Term Efficacy of Older Fluoroquinolones for Treating Typhoid Fever

(2012) Kanika Deshpande Koirala et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Enteric fever in Cambodian children is dominated by multidrug-resistant H58 Salmonella enterica serovar Typhi with intermediate susceptibility to ciprofloxacin

(2012) Kate Emary et al.   TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE

Gatifloxacin versus chloramphenicol for uncomplicated enteric fever: an open-label, randomised, controlled trial

(2011) Amit Arjyal et al.   LANCET INFECTIOUS DISEASES

The Influence of Reduced Susceptibility to Fluoroquinolones in Salmonella enterica Serovar Typhi on the Clinical Response to Ofloxacin Therapy

(2011) Christopher M. Parry et al.   PLoS Neglected Tropical Diseases

Suitable Disk Antimicrobial Susceptibility Breakpoints Defining Salmonella enterica Serovar Typhi Isolates with Reduced Susceptibility to Fluoroquinolones

(2010) C. M. Parry et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Typhoid in Kenya Is Associated with a Dominant Multidrug-Resistant Salmonella enterica Serovar Typhi Haplotype That Is Also Widespread in Southeast Asia

(2010) S. Kariuki et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Global Trends in Typhoid and Paratyphoid Fever

(2009) John A. Crump et al.   CLINICAL INFECTIOUS DISEASES

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

(2008) Kathryn E Holt et al.   NATURE GENETICS