Enhanced in planta Fitness through Adaptive Mutations in EfpR, a Dual Regulator of Virulence and Metabolic Functions in the Plant Pathogen Ralstonia solanacearum

A Resource Allocation Trade-Off between Virulence and Proliferation Drives Metabolic Versatility in the Plant Pathogen Ralstonia solanacearum

(2016) Rémi Peyraud et al.   PLoS Pathogens

FlexFlux: combining metabolic flux and regulatory network analyses

(2015) Lucas Marmiesse et al.   BMC Systems Biology

Functional assignment to positively selected sites in the core type III effector RipG7 from R alstonia solanacearum

(2015) Keke Wang et al.   MOLECULAR PLANT PATHOLOGY

The I-TASSER Suite: protein structure and function prediction

(2015) Jianyi Yang et al.   NATURE METHODS

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Multihost Experimental Evolution of the Pathogen Ralstonia solanacearum Unveils Genes Involved in Adaptation to Plants

(2014) Alice Guidot et al.   MOLECULAR BIOLOGY AND EVOLUTION

An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing

(2014) Brice Roux et al.   PLANT JOURNAL

Multiplex genome editing by natural transformation

(2014) A. B. Dalia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

opm: an R package for analysing OmniLog(R) phenotype microarray data

(2013) L. A. I. Vaas et al.   BIOINFORMATICS

Host immune responses accelerate pathogen evolution

(2013) Pankaj Trivedi et al.   ISME Journal

Ralstonia solanacearum, a widespread bacterial plant pathogen in the post-genomic era

(2013) Nemo Peeters et al.   MOLECULAR PLANT PATHOLOGY

Bacterial Adaptation through Loss of Function

(2013) Alison K. Hottes et al.   PLoS Genetics

Novel plant inputs influencing Ralstonia solanacearum during infection

(2013) A. Paola Zuluaga et al.   Frontiers in Microbiology

Pathogenomics of theRalstonia solanacearumSpecies Complex

(2012) Stéphane Genin et al.   Annual Review of Phytopathology

Top 10 plant pathogenic bacteria in molecular plant pathology

(2012) JOHN MANSFIELD et al.   MOLECULAR PLANT PATHOLOGY

What limits the evolutionary emergence of pathogens?

(2012) S. Gandon et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Detection and functional characterization of a large genomic deletion resulting in decreased pathogenicity in Ralstonia solanacearum race 3 biovar 2 strains

(2011) Adriana González et al.   ENVIRONMENTAL MICROBIOLOGY

Multihost Experimental Evolution of a Plant RNA Virus Reveals Local Adaptation and Host-Specific Mutations

(2011) S. Bedhomme et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Chromosomal Insertion Toolbox for Promoter Probing, Mutant Complementation, and Pathogenicity Studies inRalstonia solanacearum

(2011) Freddy Monteiro et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

West Nile Virus Experimental Evolution in vivo and the Trade-off Hypothesis

(2011) Eleanor R. Deardorff et al.   PLoS Pathogens

Gene functionality's influence on the second codon: A large-scale survey of second codon composition in three domains

(2010) Sen-Lin Tang et al.   GENOMICS

What is flux balance analysis?

(2010) Jeffrey D Orth et al.   NATURE BIOTECHNOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

PrhG, a Transcriptional Regulator Responding to Growth Conditions, Is Involved in the Control of the Type III Secretion System Regulon in Ralstonia solanacearum

(2009) L. Plener et al.   JOURNAL OF BACTERIOLOGY

Two Type III Secretion System Effectors fromRalstonia solanacearumGMI1000 Determine Host-Range Specificity on Tobacco

(2009) Marie Poueymiro et al.   MOLECULAR PLANT-MICROBE INTERACTIONS