Prp4 Kinase Grants the License to Splice: Control of Weak Splice Sites during Spliceosome Activation

LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq

(2014) D. A. Bitton et al.   GENOME RESEARCH

SR proteins control a complex network of RNA-processing events

(2014) Todd Bradley et al.   RNA

Fungal Alternative Splicing is Associated with Multicellular Complexity and Virulence: A Genome-Wide Multi-Species Study

(2013) K. Grutzmann et al.   DNA RESEARCH

Pick one, but be quick: 5' splice sites and the problems of too many choices

(2013) X. Roca et al.   GENES & DEVELOPMENT

Splicing Functions and Global Dependency on Fission Yeast Slu7 Reveal Diversity in Spliceosome Assembly

(2013) Shataparna Banerjee et al.   MOLECULAR AND CELLULAR BIOLOGY

The contribution of pseudouridine to stabilities and structure of RNAs

(2013) Elzbieta Kierzek et al.   NUCLEIC ACIDS RESEARCH

Thermodynamic contribution and nearest-neighbor parameters of pseudouridine-adenosine base pairs in oligoribonucleotides

(2013) G. A. Hudson et al.   RNA

Structure, function and regulation of spliceosomal RNA helicases

(2012) Olivier Cordin et al.   CURRENT OPINION IN CELL BIOLOGY

Position-dependent splicing activation and repression by SR and hnRNP proteins rely on common mechanisms

(2012) S. Erkelenz et al.   RNA

Generation of a set of conditional analog-sensitive alleles of essential protein kinases in the fission yeastSchizosaccharomyces pombe

(2011) Lubos Cipak et al.   CELL CYCLE

PomBase: a comprehensive online resource for fission yeast

(2011) V. Wood et al.   NUCLEIC ACIDS RESEARCH

Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly

(2011) S. Cho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proofreading and spellchecking: A two-tier strategy for pre-mRNA splicing quality control

(2011) D. E. Egecioglu et al.   RNA

Pre-mRNA splicing: where and when in the nucleus

(2011) Joonhee Han et al.   TRENDS IN CELL BIOLOGY

Pseudouridines in spliceosomal snRNAs

(2011) Andrew T. Yu et al.   Protein & Cell

Evolution of SR protein and hnRNP splicing regulatory factors

(2011) Anke Busch et al.   Wiley Interdisciplinary Reviews-RNA

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Yox1 links MBF-dependent transcription to completion of DNA synthesis

(2010) Blanca Gómez-Escoda et al.   EMBO REPORTS

Genomic mRNA Profiling Reveals Compensatory Mechanisms for the Requirement of the Essential Splicing Factor U2AF

(2010) V. Sridharan et al.   MOLECULAR AND CELLULAR BIOLOGY

Driving the cell cycle with a minimal CDK control network

(2010) Damien Coudreuse et al.   NATURE

Human PRP4 kinase is required for stable tri-snRNP association during spliceosomal B complex formation

(2010) Marc Schneider et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

TagDust--a program to eliminate artifacts from next generation sequencing data

(2009) T. Lassmann et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

The N-terminus of Prp1 (Prp6/U5-102 K) is essential for spliceosome activation in vivo

(2009) Martin Lützelberger et al.   NUCLEIC ACIDS RESEARCH

Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides

(2009) Daniel G. Gibson   NUCLEIC ACIDS RESEARCH

The spliceosome: a self-organized macromolecular machine in the nucleus?

(2009) José Rino et al.   TRENDS IN CELL BIOLOGY

Promoter-driven splicing regulation in fission yeast

(2008) Alberto Moldón et al.   NATURE

Human branch point consensus sequence is yUnAy

(2008) Kaiping Gao et al.   NUCLEIC ACIDS RESEARCH

Co-evolution of the branch site and SR proteins in eukaryotes

(2008) Mireya Plass et al.   TRENDS IN GENETICS