Leukocyte Motility Models Assessed through Simulation and Multi-objective Optimization-Based Model Selection

In silico evaluation and exploration of antibiotic tuberculosis treatment regimens

(2015) Elsje Pienaar et al.   BMC Systems Biology

Using argument notation to engineer biological simulations with increased confidence

(2015) K. Alden et al.   Journal of the Royal Society Interface

Automated segmentation and tracking of non-rigid objects in time-lapse microscopy videos of polymorphonuclear neutrophils

(2015) Susanne Brandes et al.   MEDICAL IMAGE ANALYSIS

Simulating cancer growth with multiscale agent-based modeling

(2015) Zhihui Wang et al.   SEMINARS IN CANCER BIOLOGY

Swarming bacteria migrate by Lévy Walk

(2015) Gil Ariel et al.   Nature Communications

Heterogeneous CD8+ T Cell Migration in the Lymph Node in the Absence of Inflammation Revealed by Quantitative Migration Analysis

(2015) Edward J. Banigan et al.   PLoS Computational Biology

Computational Modeling Predicts IL-10 Control of Lesion Sterilization by Balancing Early Host Immunity–Mediated Antimicrobial Responses with Caseation duringMycobacterium tuberculosisInfection

(2014) Nicholas A. Cilfone et al.   JOURNAL OF IMMUNOLOGY

Modelling biological behaviours with the unified modelling language: an immunological case study and critique

(2014) M. Read et al.   Journal of the Royal Society Interface

Determining Disease Intervention Strategies Using Spatially Resolved Simulations

(2013) Mark Read et al.   PLoS One

Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems

(2013) Kieran Alden et al.   PLoS Computational Biology

Engineering Simulations for Cancer Systems Biology

(2012) James Bown et al.   CURRENT DRUG TARGETS

On-Lattice Simulation of T Cell Motility, Chemotaxis, and Trafficking in the Lymph Node Paracortex

(2012) Gib Bogle et al.   PLoS One

A Decade of Imaging Cellular Motility and Interaction Dynamics in the Immune System

(2012) R. N. Germain et al.   SCIENCE

Differential RET Signaling Pathways Drive Development of the Enteric Lymphoid and Nervous Systems

(2012) A. Patel et al.   Science Signaling

Visualizing the Neutrophil Response to Sterile Tissue Injury in Mouse Dermis Reveals a Three-Phase Cascade of Events

(2011) Lai Guan Ng et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

T-cell movement on the reticular network

(2011) Graham M. Donovan et al.   JOURNAL OF THEORETICAL BIOLOGY

Techniques for grounding agent-based simulations in the real domain: a case study in experimental autoimmune encephalomyelitis

(2011) Mark Read et al.   MATHEMATICAL AND COMPUTER MODELLING OF DYNAMICAL SYSTEMS

Defining the quantitative limits of intravital two-photon lymphocyte tracking

(2011) J. Textor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell adhesion: integrating cytoskeletal dynamics and cellular tension

(2010) J. Thomas Parsons et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The Lévy flight paradigm: random search patterns and mechanisms

(2009) A. M. Reynolds et al.   ECOLOGY

Simulating T-cell motility in the lymph node paracortex with a packed lattice geometry

(2008) Gib Bogle et al.   IMMUNOLOGY AND CELL BIOLOGY

Agent-based modeling of host–pathogen systems: The successes and challenges

(2008) Amy L. Bauer et al.   INFORMATION SCIENCES

Nonmuscle myosin heavy chain IIA mediates integrin LFA-1 de-adhesion during T lymphocyte migration

(2008) Nicole A. Morin et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Lévy flights and superdiffusion in the context of biological encounters and random searches

(2008) G.M. Viswanathan et al.   Physics of Life Reviews