Whole-genome sequencing of the endangered bovine species Gayal (Bos frontalis) provides new insights into its genetic features

Whole-Genome Resequencing Analysis of Hanwoo and Yanbian Cattle to Identify Genome-Wide SNPs and Signatures of Selection

(2015) Jung-Woo Choi et al.   MOLECULES AND CELLS

Semi-domesticated and Irreplaceable Genetic Resource Gayal (Bos frontalis) Needs Effective Genetic Conservation in Bangladesh: A Review

(2014) Md. Rasel Uzzaman et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Mannose-binding lectin 2 gene polymorphism and susceptibility to upper respiratory tract infection among endurance athletes

(2014) Farzad Zehsaz et al.   European Journal of Sport Science

The Receptor for the Complement C3a Anaphylatoxin (C3aR) Provides Host Protection against Listeria monocytogenes-Induced Apoptosis

(2014) S. L. Mueller-Ortiz et al.   JOURNAL OF IMMUNOLOGY

Genome-wide variation within and between wild and domestic yak

(2014) Kun Wang et al.   Molecular Ecology Resources

Whole-Genome Analyses of Korean Native and Holstein Cattle Breeds by Massively Parallel Sequencing

(2014) Jung-Woo Choi et al.   PLoS One

Regulatory mutations in theA2Mgene are involved in the mastitis susceptibility in dairy cows

(2013) X. G. Wang et al.   ANIMAL GENETICS

Whole genome sequencing of Gir cattle for identifying polymorphisms and loci under selection

(2013) Xiaoping Liao et al.   GENOME

Pitfalls of predicting complex traits from SNPs

(2013) Naomi R. Wray et al.   NATURE REVIEWS GENETICS

Functional polymorphisms in Toll-like receptor genes for innate immunity in farm animals

(2013) Karel Novák   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY

Polymorphisms of the insulin-like growth factor-binding protein 3 gene (IGFBP3) in gayal (Bos frontalis)

(2012) Dongmei Xi et al.   GENE

Karyotype analysis of mithun (Bos frontalis) and mithun bull x Brahman cow hybrids

(2012) K.-X. Qu et al.   GENETICS AND MOLECULAR RESEARCH

Genome Sequence and Assembly of Bos indicus

(2012) F. C. Canavez et al.   JOURNAL OF HEREDITY

Mutations in lipopolysaccharide-binding protein (LBP) gene change the susceptibility to clinical mastitis in Chinese Holstein

(2012) Jienan Cheng et al.   MOLECULAR BIOLOGY REPORTS

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Whole-genome sequencing of giant pandas provides insights into demographic history and local adaptation

(2012) Shancen Zhao et al.   NATURE GENETICS

The yak genome and adaptation to life at high altitude

(2012) Qiang Qiu et al.   NATURE GENETICS

The relationship between the variants of the bovine MBL2 gene and milk production traits, mastitis, serum MBL-C levels and complement activity

(2012) Xinju Wang et al.   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

(2011) Paul Stothard et al.   BMC GENOMICS

CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

(2011) A. Abyzov et al.   GENOME RESEARCH

Inference of human population history from individual whole-genome sequences

(2011) Heng Li et al.   NATURE

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Genetic diversity and origin of Gayal and cattle in Yunnan revealed by mtDNA control region andSRYgene sequence variation

(2010) X. Gou et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Sequence Analysis and Polymorphism Discovery in 4 Members of the Bovine Cathelicidin Gene Family

(2009) Erin N. Gillenwaters et al.   JOURNAL OF HEREDITY

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

(2009) Ken Chen et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

(2009) Prateek Kumar et al.   Nature Protocols

Mapping genes for complex traits in domestic animals and their use in breeding programmes

(2009) Michael E. Goddard et al.   NATURE REVIEWS GENETICS

The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

(2009) et al.   SCIENCE

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery

(2009) Sebastian H Eck et al.   GENOME BIOLOGY

A whole-genome assembly of the domestic cow, Bos taurus

(2009) Aleksey V Zimin et al.   GENOME BIOLOGY

Mannose-binding lectin haplotypes influence Brucella abortus infection in the water buffalo (Bubalus bubalis)

(2008) R. Capparelli et al.   IMMUNOGENETICS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

Toll-like receptors TLR1, TLR2 and TLR4 gene mutations and natural resistance to Mycobacterium avium subsp. paratuberculosis infection in cattle

(2008) R. Mucha et al.   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY