Dual-species transcriptional profiling during systemic candidiasis reveals organ-specific host-pathogen interactions

Candidalysin is a fungal peptide toxin critical for mucosal infection

(2016) David L. Moyes et al.   NATURE

Neutrophil Attack Triggers Extracellular Trap-Dependent Candida Cell Wall Remodeling and Altered Immune Recognition

(2016) Alex Hopke et al.   PLoS Pathogens

In Vivo Transcriptional Profiling of Human Pathogenic Fungi during Infection: Reflecting the Real Life?

(2016) Stefanie Allert et al.   PLoS Pathogens

How to Predict Molecular Interactions between Species?

(2016) Sylvie Schulze et al.   Frontiers in Microbiology

Orchestrating high-throughput genomic analysis with Bioconductor

(2015) Wolfgang Huber et al.   NATURE METHODS

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Cell Wall Remodeling Enzymes Modulate Fungal Cell Wall Elasticity and Osmotic Stress Resistance

(2015) Iuliana V. Ene et al.   mBio

RNA Enrichment Method for Quantitative Transcriptional Analysis of Pathogens In Vivo Applied to the Fungus Candida albicans

(2015) Sara Amorim-Vaz et al.   mBio

Activation and Alliance of Regulatory Pathways in C. albicans during Mammalian Infection

(2015) Wenjie Xu et al.   PLOS BIOLOGY

FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species

(2014) S. Priebe et al.   BIOINFORMATICS

In vivo imaging of disseminated murine Candida albicans infection reveals unexpected host sites of fungal persistence during antifungal therapy

(2014) Ilse D. Jacobsen et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Metabolism impacts upon Candida immunogenicity and pathogenicity at multiple levels

(2014) Alistair J.P. Brown et al.   TRENDS IN MICROBIOLOGY

Candida albicans Hypha Formation and Mannan Masking of β-Glucan Inhibit Macrophage Phagosome Maturation

(2014) Judith M. Bain et al.   mBio

Fungal Pathogens: Survival and Replication within Macrophages

(2014) Andrew S. Gilbert et al.   Cold Spring Harbor Perspectives in Medicine

Glycerophosphocholine Utilization byCandida albicans

(2013) Andrew C. Bishop et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

CX3CR1-dependent renal macrophage survival promotes Candida control and host survival

(2013) Michail S. Lionakis et al.   JOURNAL OF CLINICAL INVESTIGATION

Inflammatory Monocytes Mediate Early and Organ-Specific Innate Defense During Systemic Candidiasis

(2013) Lisa Y. Ngo et al.   JOURNAL OF INFECTIOUS DISEASES

Epidemiology and sites of involvement of invasive fungal infections in patients with haematological malignancies: a 20-year autopsy study

(2013) Russell E. Lewis et al.   MYCOSES

A Core Filamentation Response Network in Candida albicans Is Restricted to Eight Genes

(2013) Ronny Martin et al.   PLoS One

Dynamic Transcript Profiling of Candida albicans Infection in Zebrafish: A Pathogen-Host Interaction Study

(2013) Yan Yu Chen et al.   PLoS One

oPOSSUM-3: Advanced Analysis of Regulatory Motif Over-Representation Across Genes or ChIP-Seq Datasets

(2013) Andrew T. Kwon et al.   G3-Genes Genomes Genetics

Fungal Iron Availability during Deep Seated Candidiasis Is Defined by a Complex Interplay Involving Systemic and Local Events

(2013) Joanna Potrykus et al.   PLoS Pathogens

Candida and Host Determinants of Susceptibility to Invasive Candidiasis

(2013) Michail S. Lionakis et al.   PLoS Pathogens

Differential Adaptation of Candida albicans In Vivo Modulates Immune Recognition by Dectin-1

(2013) Mohlopheni J. Marakalala et al.   PLoS Pathogens

Metabolic remodeling in iron-deficient fungi

(2012) Caroline C. Philpott et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

The extended TILAR approach: a novel tool for dynamic modeling of the transcription factor network regulating the adaption to in vitro cultivation of murine hepatocytes

(2012) Sebastian Vlaic et al.   BMC Systems Biology

A Recently Evolved Transcriptional Network Controls Biofilm Development in Candida albicans

(2012) Clarissa J. Nobile et al.   CELL

Host carbon sources modulate cell wall architecture, drug resistance and virulence in a fungal pathogen

(2012) Iuliana V. Ene et al.   CELLULAR MICROBIOLOGY

Type I Interferons Promote Fatal Immunopathology by Regulating Inflammatory Monocytes and Neutrophils during Candida Infections

(2012) Olivia Majer et al.   PLoS Pathogens

Stage Specific Assessment of Candida albicans Phagocytosis by Macrophages Identifies Cell Wall Composition and Morphogenesis as Key Determinants

(2012) Leanne E. Lewis et al.   PLoS Pathogens

Innate Antifungal Immunity: The Key Role of Phagocytes

(2011) Gordon D. Brown   Annual Review of Immunology

An Iron Homeostasis Regulatory Circuit with Reciprocal Roles in Candida albicans Commensalism and Pathogenesis

(2011) Changbin Chen et al.   Cell Host & Microbe

Growth of Candida albicans hyphae

(2011) Peter E. Sudbery   NATURE REVIEWS MICROBIOLOGY

From Attachment to Damage: Defined Genes of Candida albicans Mediate Adhesion, Invasion and Damage during Interaction with Oral Epithelial Cells

(2011) Betty Wächtler et al.   PLoS One

Adaptations of Candida albicans for Growth in the Mammalian Intestinal Tract

(2010) Ari Rosenbach et al.   EUKARYOTIC CELL

Recognition of Yeast by Murine Macrophages Requires Mannan but Not Glucan

(2010) Sabine Keppler-Ross et al.   EUKARYOTIC CELL

Organ-Specific Innate Immune Responses in a Mouse Model of Invasive Candidiasis

(2010) Michail S. Lionakis et al.   Journal of Innate Immunity

Cell wall integrity is linked to mitochondria and phospholipid homeostasis in Candida albicans through the activity of the post-transcriptional regulator Ccr4-Pop2

(2010) Michael J. Dagley et al.   MOLECULAR MICROBIOLOGY

Evolutionary Tinkering with Conserved Components of a Transcriptional Regulatory Network

(2010) Hugo Lavoie et al.   PLOS BIOLOGY

Massive induction of innate immune response toCandida albicansin the kidney in a murine intravenous challenge model

(2009) Donna M. MacCallum   FEMS YEAST RESEARCH

Early-Expressed Chemokines Predict Kidney Immunopathology in Experimental Disseminated Candida albicans Infections

(2009) Donna M. MacCallum et al.   PLoS One

lumi: a pipeline for processing Illumina microarray

(2008) P. Du et al.   BIOINFORMATICS

Genome-wide analysis of Candida albicans gene expression patterns during infection of the mammalian kidney

(2008) Louise A. Walker et al.   FUNGAL GENETICS AND BIOLOGY

Analysis of PRA1 and Its Relationship to Candida albicans- Macrophage Interactions

(2008) A. Marcil et al.   INFECTION AND IMMUNITY