An H4K16 histone acetyltransferase mediates decondensation of the X chromosome in C. elegans males

Anchoring of Heterochromatin to the Nuclear Lamina Reinforces Dosage Compensation-Mediated Gene Repression

(2016) Martha J. Snyder et al.   PLoS Genetics

Balancing up and downregulation of the C. elegans X chromosomes

(2015) Alyssa C Lau et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Condensin-driven remodelling of X chromosome topology during dosage compensation

(2015) Emily Crane et al.   NATURE

Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells

(2015) Sarina Ravens et al.   Epigenetics & Chromatin

Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans

(2015) Maxwell Kramer et al.   PLoS Genetics

Complex coding of endogenous siRNA, transcriptional silencing and H3K9 methylation on native targets of germline nuclear RNAi in C. elegans

(2015) Julie Ni et al.   BMC GENOMICS

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Differential spatial and structural organization of the X chromosome underlies dosage compensation inC. elegans

(2014) Rahul Sharma et al.   GENES & DEVELOPMENT

Sex-Biased Gene Expression and Evolution of the X Chromosome in Nematodes

(2014) S. E. Albritton et al.   GENETICS

Transcriptional control of a whole chromosome: emerging models for dosage compensation

(2014) Francesco Ferrari et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells

(2014) Pierre Therizols et al.   SCIENCE

The C. elegans dosage compensation complex mediates interphase X chromosome compaction

(2014) Alyssa C Lau et al.   Epigenetics & Chromatin

HTZ-1/H2A.z and MYS-1/MYST HAT act redundantly to maintain cell fates in somatic gonadal cells through repression of ceh-22 in C. elegans

(2013) Y. Shibata et al.   DEVELOPMENT

Mammalian X Upregulation Is Associated with Enhanced Transcription Initiation, RNA Half-Life, and MOF-Mediated H4K16 Acetylation

(2013) Xinxian Deng et al.   DEVELOPMENTAL CELL

Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries

(2013) J. Wang et al.   GENES & DEVELOPMENT

H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction

(2013) G. C. A. Taylor et al.   GENOME RESEARCH

Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation

(2013) William S Kruesi et al.   eLife

Genome-wide analysis of condensin binding in Caenorhabditis elegans

(2013) Anna-Lena Kranz et al.   GENOME BIOLOGY

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

The Histone Acetyltransferase MOF Is a Key Regulator of the Embryonic Stem Cell Core Transcriptional Network

(2012) Xiangzhi Li et al.   Cell Stem Cell

X chromosome inactivation in the cycle of life

(2012) T. S. Barakat et al.   DEVELOPMENT

Caenorhabditis elegans Dosage Compensation Regulates Histone H4 Chromatin State on X Chromosomes

(2012) M. B. Wells et al.   MOLECULAR AND CELLULAR BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription

(2012) Thomas Conrad et al.   NATURE REVIEWS GENETICS

Distinct contributions of MSL complex subunits to the transcriptional enhancement responsible for dosage compensation in Drosophila

(2012) David Dunlap et al.   NUCLEIC ACIDS RESEARCH

Mechanisms and Evolutionary Patterns of Mammalian and Avian Dosage Compensation

(2012) Philippe Julien et al.   PLOS BIOLOGY

H4K20me1 Contributes to Downregulation of X-Linked Genes for C. elegans Dosage Compensation

(2012) Anne Vielle et al.   PLoS Genetics

The NSL Complex Regulates Housekeeping Genes in Drosophila

(2012) Kin Chung Lam et al.   PLoS Genetics

Relative overexpression of X-linked genes in mouse embryonic stem cells is consistent with Ohno's hypothesis

(2011) Hong Lin et al.   NATURE GENETICS

Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster

(2011) Xinxian Deng et al.   NATURE GENETICS

The MOF-containing NSL complex associates globally with housekeeping genes, but activates only a defined subset

(2011) Christian Feller et al.   NUCLEIC ACIDS RESEARCH

Chromosome Painting Reveals Asynaptic Full Alignment of Homologs and HIM-8–Dependent Remodeling of X Chromosome Territories during Caenorhabditis elegans Meiosis

(2011) Kentaro Nabeshima et al.   PLoS Genetics

An evolutionary consequence of dosage compensation on Drosophila melanogaster female X-chromatin structure?

(2010) Yu Zhang et al.   BMC GENOMICS

Targeting X chromosomes for repression

(2010) Barbara J Meyer   CURRENT OPINION IN GENETICS & DEVELOPMENT

High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans

(2010) S. Ercan et al.   GENOME RESEARCH

Analysis of Active and Inactive X Chromosome Architecture Reveals the Independent Organization of 30 nm and Large-Scale Chromatin Structures

(2010) Catherine Naughton et al.   MOLECULAR CELL

The Nonspecific Lethal Complex Is a Transcriptional Regulator in Drosophila

(2010) Sunil Jayaramaiah Raja et al.   MOLECULAR CELL

RNA sequencing shows no dosage compensation of the active X-chromosome

(2010) Yuanyan Xiong et al.   NATURE GENETICS

Accessibility of the Drosophila genome discriminates PcG repression, H4K16 acetylation and replication timing

(2010) Oliver Bell et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The effects of histone H4 tail acetylations on cation-induced chromatin folding and self-association

(2010) Abdollah Allahverdi et al.   NUCLEIC ACIDS RESEARCH

Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2

(2010) Kohta Ikegami et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

MYST family histone acetyltransferases take center stage in stem cells and development

(2009) Anne K. Voss et al.   BIOESSAYS

CEAS: cis-regulatory element annotation system

(2009) Hyunjin Shin et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes

(2009) Zhibin Wang et al.   CELL

Three Distinct Condensin Complexes Control C. elegans Chromosome Dynamics

(2009) Gyorgyi Csankovszki et al.   CURRENT BIOLOGY

A condensin-like dosage compensation complex acts at a distance to control expression throughout the genome

(2009) J. Jans et al.   GENES & DEVELOPMENT

Subunit Composition and Substrate Specificity of a MOF-containing Histone Acetyltransferase Distinct from the Male-specific Lethal (MSL) Complex

(2009) Yong Cai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Restricting Dosage Compensation Complex Binding to the X Chromosomes by H2A.Z/HTZ-1

(2009) Emily L. Petty et al.   PLoS Genetics

X Chromosome Dosage Compensation: How Mammals Keep the Balance

(2008) Bernhard Payer et al.   Annual Review of Genetics

Genome-wide Analysis Reveals MOF as a Key Regulator of Dosage Compensation and Gene Expression in Drosophila

(2008) Jop Kind et al.   CELL

An RNAi Screen of Chromatin Proteins Identifies Tip60-p400 as a Regulator of Embryonic Stem Cell Identity

(2008) Thomas G. Fazzio et al.   CELL

30 nm Chromatin Fibre Decompaction Requires both H4-K16 Acetylation and Linker Histone Eviction

(2008) Philip J.J. Robinson et al.   JOURNAL OF MOLECULAR BIOLOGY

Mof (MYST1 or KAT8) Is Essential for Progression of Embryonic Development Past the Blastocyst Stage and Required for Normal Chromatin Architecture

(2008) T. Thomas et al.   MOLECULAR AND CELLULAR BIOLOGY

Combinatorial patterns of histone acetylations and methylations in the human genome

(2008) Zhibin Wang et al.   NATURE GENETICS

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY