Begomovirus-Associated Satellite DNA Diversity Captured Through Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae)

Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae) Reveal Novel Begomovirus Species in the New and OldWorlds

(2015) Karyna Rosario et al.   Viruses-Basel

Metavir 2: new tools for viral metagenome comparison and assembled virome analysis

(2014) Simon Roux et al.   BMC BIOINFORMATICS

Association of Satellites with a Mastrevirus in Natural Infection: Complexity of Wheat Dwarf India Virus Disease

(2014) J. Kumar et al.   JOURNAL OF VIROLOGY

RNA Viral Metagenome of Whiteflies Leads to the Discovery and Characterization of a Whitefly-Transmitted Carlavirus in North America

(2014) Karyna Rosario et al.   PLoS One

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation

(2014) Brejnev Muhizi Muhire et al.   PLoS One

Circomics of Cuban geminiviruses reveals the first alpha-satellite DNA in the Caribbean

(2014) Holger Jeske et al.   VIRUS GENES

Advances in Understanding Begomovirus Satellites

(2013) Xueping Zhou   Annual Review of Phytopathology

A Naturally Occurring Defective DNA Satellite Associated with a Monopartite Begomovirus: Evidence for Recombination between Alphasatellite and Betasatellite

(2013) Changjun Huang et al.   Viruses-Basel

A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomics

(2012) Karyna Rosario et al.   ARCHIVES OF VIROLOGY

A novel class of DNA satellites associated with New World begomoviruses

(2012) Elvira Fiallo-Olivé et al.   VIROLOGY

Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India

(2012) Achuit K Singh et al.   Virology Journal

Silencing suppressor activity of a begomovirus DNA β encoded protein and its effect on heterologous helper virus replication

(2012) Omid Eini et al.   VIRUS RESEARCH

Discovery of a novel mastrevirus and alphasatellite-like circular DNA in dragonflies (Epiprocta) from Puerto Rico

(2012) Karyna Rosario et al.   VIRUS RESEARCH

A survey of geminiviruses and associated satellite DNAs in the cotton-growing areas of northwestern India

(2011) Valerio Zaffalon et al.   ARCHIVES OF VIROLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Exploring the Diversity of Plant DNA Viruses and Their Satellites Using Vector-Enabled Metagenomics on Whiteflies

(2011) Terry Fei Fan Ng et al.   PLoS One

Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes

(2011) Terry Fei Fan Ng et al.   PLoS One

Suppression of Methylation-Mediated Transcriptional Gene Silencing by βC1-SAHH Protein Interaction during Geminivirus-Betasatellite Infection

(2011) Xiuling Yang et al.   PLoS Pathogens

Association of an atypical alphasatellite with a bipartite New World begomovirus

(2010) G. Romay et al.   ARCHIVES OF VIROLOGY

Artificial and natural duplicates in pyrosequencing reads of metagenomic data

(2010) Beifang Niu et al.   BMC BIOINFORMATICS

An unusual alphasatellite associated with monopartite begomoviruses attenuates symptoms and reduces betasatellite accumulation

(2010) A. M. Idris et al.   JOURNAL OF GENERAL VIROLOGY

Differential interaction between cassava mosaic geminiviruses and geminivirus satellites

(2010) B. L. Patil et al.   JOURNAL OF GENERAL VIROLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Post-transcriptional gene silencing suppressor activity of two non-pathogenic alphasatellites associated with a begomovirus

(2010) Muhammad Shah Nawaz-ul-Rehman et al.   VIROLOGY

The first DNA 1-like α satellites in association with New World begomoviruses in natural infections

(2010) T. Paprotka et al.   VIROLOGY

Molecular diversity of Cotton leaf curl Gezira virus isolates and their satellite DNAs associated with okra leaf curl disease in Burkina Faso

(2010) Fidèle Tiendrébéogo et al.   Virology Journal

Characterization of alphasatellites associated with monopartite begomovirus/betasatellite complexes in Yunnan, China

(2010) Yan Xie et al.   Virology Journal

Identification of the virulence factors and suppressors of posttranscriptional gene silencing encoded by Ageratum yellow vein virus, a monopartite begomovirus

(2010) P. Sharma et al.   VIRUS RESEARCH

Complete nucleotide sequence of chili leaf curl virus and its associated satellites naturally infecting potato in Pakistan

(2009) M. Mubin et al.   ARCHIVES OF VIROLOGY

Evolution of geminiviruses and their satellites

(2009) Muhammad Shah Nawaz-ul-Rehman et al.   FEBS LETTERS

Improved DNA Barcoding Method for Bemisia tabaci and Related Aleyrodidae: Development of Universal and Bemisia tabaci Biotype-Specific Mitochondrial Cytochrome c Oxidase I Polymerase Chain Reaction Primers

(2009) Robert G. Shatters et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Maintenance of an Old World Betasatellite by a New World Helper Begomovirus and Possible Rapid Adaptation of the Betasatellite

(2009) M. S. Nawaz-ul-Rehman et al.   JOURNAL OF VIROLOGY

Recommendations for the classification and nomenclature of the DNA-β satellites of begomoviruses

(2008) R. W. Briddon et al.   ARCHIVES OF VIROLOGY

Molecular characterization of begomoviruses and DNA satellites from Vietnam: additional evidence that the New World geminiviruses were present in the Old World prior to continental separation

(2007) C. Ha et al.   JOURNAL OF GENERAL VIROLOGY