De novo transcriptome analysis reveals tissue-specific differences in gene expression in Salix arbutifolia

De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat

(2015) Jinpeng Zhang et al.   GENOMICS

Transcriptome and proteome analysis of Eucalyptus infected with Calonectria pseudoreteaudii

(2015) Quanzhu Chen et al.   Journal of Proteomics

Transcriptome Profiling of the Potato (Solanum tuberosum L.) Plant under Drought Stress and Water-Stimulus Conditions

(2015) Lei Gong et al.   PLoS One

Transcriptome dynamics of developing maize leaves and genomewide prediction ofciselements and their cognate transcription factors

(2015) Chun-Ping Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis of the AP2/ERF gene family inSalix arbutifolia

(2015) Guodong Rao et al.   FEBS Open Bio

Transcriptome Sequencing of Two Phenotypic Mosaic Eucalyptus Trees Reveals Large Scale Transcriptome Re-Modelling

(2015) Amanda Padovan et al.   PLoS One

De novo RNA-Seq Analysis of the Venus Clam, Cyclina sinensis, and the Identification of Immune-Related Genes

(2015) Baoping Pan et al.   PLoS One

Transcriptome Profiles of Populus euphratica upon Heat Shock stress

(2014) Jinhuan Chen et al.   CURRENT GENOMICS

KEGG-PATH: Kyoto encyclopedia of genes and genomes-based pathway analysis using a path analysis model

(2014) Junli Du et al.   Molecular BioSystems

Transcriptome dynamics of a desert poplar (Populus pruinosa) in response to continuous salinity stress

(2014) Jian Zhang et al.   PLANT CELL REPORTS

De Novo Transcriptome and Small RNA Analysis of Two Chinese Willow Cultivars Reveals Stress Response Genes in Salix matsudana

(2014) Guodong Rao et al.   PLoS One

Absorption, Metabolism, and Effects at Transcriptome Level of a Standardized French Oak Wood Extract, Robuvit, in Healthy Volunteers: Pilot Study

(2013) Fausta Natella et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Construction of Customized Sub-Databases from NCBI-nr Database for Rapid Annotation of Huge Metagenomic Datasets Using a Combined BLAST and MEGAN Approach

(2013) Ke Yu et al.   PLoS One

An efficient RNA interference screening strategy for gene functional analysis

(2012) Chih-Hung Chang et al.   BMC GENOMICS

An Improved Protocol for the Isolation of RNA from Roots of Tea (Camellia sinensis (L.) O. Kuntze)

(2011) Richard Chalo Muoki et al.   MOLECULAR BIOTECHNOLOGY

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus

(2010) Sofia Berlin et al.   BMC GENOMICS

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Swift: primary data analysis for the Illumina Solexa sequencing platform

(2009) Nava Whiteford et al.   BIOINFORMATICS