Phosphoproteome and Transcriptome of RA-Responsive and RA-Resistant Breast Cancer Cell Lines

MST kinases in development and disease

(2015) Barry J. Thompson et al.   JOURNAL OF CELL BIOLOGY

Phosphorylation of the retinoic acid receptor RAR 2 is crucial for the neuronal differentiation of mouse embryonic stem cells

(2014) Z. Al Tanoury et al.   JOURNAL OF CELL SCIENCE

Impact of Digestion Conditions on Phosphoproteomics

(2014) Clarissa Dickhut et al.   JOURNAL OF PROTEOME RESEARCH

Genes involved in cell adhesion and signaling: a new repertoire of retinoic acid receptor target genes in mouse embryonic fibroblasts

(2013) Z. Al Tanoury et al.   JOURNAL OF CELL SCIENCE

Vitamin A and retinoid signaling: genomic and nongenomic effects

(2013) Ziad Al Tanoury et al.   JOURNAL OF LIPID RESEARCH

Evaluation and Optimization of Mass Spectrometric Settings during Data-dependent Acquisition Mode: Focus on LTQ-Orbitrap Mass Analyzers

(2013) Anastasia Kalli et al.   JOURNAL OF PROTEOME RESEARCH

Immunodepletion Plasma Proteomics by TripleTOF 5600 and Orbitrap Elite/LTQ-Orbitrap Velos/Q Exactive Mass Spectrometers

(2013) Kelly A. Jones et al.   JOURNAL OF PROTEOME RESEARCH

Manteia, a predictive data mining system for vertebrate genes and its applications to human genetic diseases

(2013) Olivier Tassy et al.   NUCLEIC ACIDS RESEARCH

Retinoic Acid Receptors Recognize the Mouse Genome through Binding Elements with Diverse Spacing and Topology

(2012) Emmanuel Moutier et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Tools for analyzing the phosphoproteome and other phosphorylated biomolecules: A review

(2011) Alexander Leitner et al.   ANALYTICA CHIMICA ACTA

Titanium dioxide as chemo-affinity chromatographic sorbent of biomolecular compounds — Applications in acidic modification-specific proteomics

(2011) Kasper Engholm-Keller et al.   Journal of Proteomics

Nuclear retinoic acid receptors: Conductors of the retinoic acid symphony during development

(2011) Eric Samarut et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Dissecting the retinoid-induced differentiation of F9 embryonal stem cells by integrative genomics

(2011) M. A. Mendoza-Parra et al.   Molecular Systems Biology

A retinoic acid receptor RARα pool present in membrane lipid rafts forms complexes with G protein αQ to activate p38MAPK

(2011) A Piskunov et al.   ONCOGENE

Cullin 3 mediates SRC-3 ubiquitination and degradation to control the retinoic acid response

(2011) C. Ferry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis

(2011) Shaun Mahony et al.   GENOME BIOLOGY

The molecular physiology of nuclear retinoic acid receptors. From health to disease

(2010) Vanessa Duong et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

(2010) Edward L. Huttlin et al.   CELL

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Genomic Antagonism between Retinoic Acid and Estrogen Signaling in Breast Cancer

(2009) Sujun Hua et al.   CELL

Human BAMBI Cooperates with Smad7 to Inhibit Transforming Growth Factor-β Signaling

(2009) Xiaohua Yan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A coordinated phosphorylation cascade initiated by p38MAPK/MSK1 directs RARα to target promoters

(2008) Nathalie Bruck et al.   EMBO JOURNAL

Breast Tumor Cells with PI3K Mutation or HER2 Amplification Are Selectively Addicted to Akt Signaling

(2008) Qing-Bai She et al.   PLoS One