The Potential of Class II Bacteriocins to Modify Gut Microbiota to Improve Host Health

Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour

(2015) Lieve Desbonnet et al.   BRAIN BEHAVIOR AND IMMUNITY

Symbiotic and antibiotic interactions between gut commensal microbiota and host immune system

(2015) Mantas Kazimieras Malys et al.   Medicina-Lithuania

Bacteriocin production augments niche competition by enterococci in the mammalian gastrointestinal tract

(2015) Sushma Kommineni et al.   NATURE

The impact of oral consumption ofLactobacillus plantarumP-8 on faecal bacteria revealed by pyrosequencing

(2015) L.Y. Kwok et al.   Beneficial Microbes

Symbiotic and antibiotic interactions between gut commensal microbiota and host immune system

(2015) Mantas Kazimieras Malys et al.   Medicina-Lithuania

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Reshaping the Gut Microbiota at an Early Age: Functional Impact on Obesity Risk?

(2013) R. Luoto et al.   ANNALS OF NUTRITION AND METABOLISM

Potential applications of gut microbiota to control human physiology

(2013) Özgün Candan Onarman Umu et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

In VivoAssessment of Growth and Virulence Gene Expression during Commensal and Pathogenic Lifestyles ofluxABCDE-Tagged Enterococcus faecalis Strains in Murine Gastrointestinal and Intravenous Infection Models

(2013) Sabina Leanti La Rosa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gut bacterial microbiota and obesity

(2013) M. Million et al.   CLINICAL MICROBIOLOGY AND INFECTION

Functional Genetic Analysis of the GarML Gene Cluster in Lactococcus garvieae DCC43 Gives New Insights into Circular Bacteriocin Biosynthesis

(2013) C. Gabrielsen et al.   JOURNAL OF BACTERIOLOGY

The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism

(2013) Gijs den Besten et al.   JOURNAL OF LIPID RESEARCH

Gut solutions to a gut problem: bacteriocins, probiotics and bacteriophage for control of Clostridium difficile infection

(2013) M. C. Rea et al.   JOURNAL OF MEDICAL MICROBIOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Targeting the Microbiota to Address Diet-Induced Obesity: A Time Dependent Challenge

(2013) Siobhan F. Clarke et al.   PLoS One

Diet-Microbiota Interactions and Their Implications for Healthy Living

(2013) Ian Jeffery et al.   Nutrients

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

The role of the gut microbiota in nutrition and health

(2012) Harry J. Flint et al.   Nature Reviews Gastroenterology & Hepatology

Bacteriocins — a viable alternative to antibiotics?

(2012) Paul D. Cotter et al.   NATURE REVIEWS MICROBIOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Role of the intestinal microbiome in health and disease: from correlation to causation

(2012) Willem M de Vos et al.   NUTRITION REVIEWS

Effect of Lactobacillus salivarius Bacteriocin Abp118 on the Mouse and Pig Intestinal Microbiota

(2012) Eliette Riboulet-Bisson et al.   PLoS One

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Lactic acid bacteria contribution to gut microbiota complexity: lights and shadows

(2012) Enrica Pessione   Frontiers in Cellular and Infection Microbiology

The intestinal microbiota dysbiosis and Clostridium difficile infection: is there a relationship with inflammatory bowel disease?

(2012) Justyna Bien et al.   Therapeutic Advances in Gastroenterology

Bacteriocin Production: a Probiotic Trait?

(2011) Alleson Dobson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

The association of Streptococcus bovis/gallolyticus with colorectal tumors: The nature and the underlying mechanisms of its etiological role

(2011) Ahmed S Abdulamir et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Probiotics, prebiotics, and synbiotics: impact on the gut immune system and allergic reactions

(2011) P. Gourbeyre et al.   JOURNAL OF LEUKOCYTE BIOLOGY

Target recognition, resistance, immunity and genome mining of class II bacteriocins from Gram-positive bacteria

(2011) M. Kjos et al.   MICROBIOLOGY-SGM

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Effect of mother’s weight on infant’s microbiota acquisition, composition, and activity during early infancy: a prospective follow-up study initiated in early pregnancy

(2010) Maria Carmen Collado et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Characterization of Garvicin ML, a Novel Circular Bacteriocin Produced byLactococcus garvieaeDCC43, Isolated from Mallard Ducks (Anas platyrhynchos)

(2010) Juan Borrero et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Safety assessment and evaluation of probiotic potential of bacteriocinogenic Enterococcus faecium KH 24 strain under in vitro and in vivo conditions

(2010) Arun Bhardwaj et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon

(2010) M. C. Rea et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

In vivo study on the effectiveness of pediocin PA-1 and Pediococcus acidilactici UL5 at inhibiting Listeria monocytogenes

(2009) Nassra Dabour et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

(2009) Chenhong Zhang et al.   ISME Journal

An overview of the mosaic bacteriocin pln loci from Lactobacillus plantarum

(2009) Dzung B. Diep et al.   PEPTIDES

Capacity of Human Nisin- and Pediocin-Producing Lactic Acid Bacteria To Reduce Intestinal Colonization by Vancomycin-Resistant Enterococci

(2008) M. Millette et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)

(2008) Scot E Dowd et al.   BMC MICROBIOLOGY

Intestinal carriage of Staphylococcus aureus: how does its frequency compare with that of nasal carriage and what is its clinical impact?

(2008) D. S. Acton et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Predominance of a bacteriocin-producing Lactobacillus salivarius component of a five-strain probiotic in the porcine ileum and effects on host immune phenotype

(2008) Maria C. Walsh et al.   FEMS MICROBIOLOGY ECOLOGY

Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis

(2008) Harry J. Flint et al.   NATURE REVIEWS MICROBIOLOGY