Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain

Massively parallel neural circuits for stereoscopic color vision: Encoding, decoding and identification

(2015) Aurel A. Lazar et al.   NEURAL NETWORKS

Spiking neural circuits with dendritic stimulus processors

(2014) Aurel A. Lazar et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Extensible visualization and analysis for multidimensional images using Vaa3D

(2014) Hanchuan Peng et al.   Nature Protocols

Channel identification machines for multidimensional receptive fields

(2014) Aurel A. Lazar et al.   Frontiers in Computational Neuroscience

Volterra dendritic stimulus processors and biophysical spike generators with intrinsic noise sources

(2014) Aurel A. Lazar et al.   Frontiers in Computational Neuroscience

OpenWorm: an open-science approach to modeling Caenorhabditis elegans

(2014) Balázs Szigeti et al.   Frontiers in Computational Neuroscience

Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis

(2014) Hanchuan Peng et al.   Nature Communications

HRLSim: A High Performance Spiking Neural Network Simulator for GPGPU Clusters

(2014) Kirill Minkovich et al.   IEEE Transactions on Neural Networks and Learning Systems

A visual motion detection circuit suggested by Drosophila connectomics

(2013) Shin-ya Takemura et al.   NATURE

A directional tuning map of Drosophila elementary motion detectors

(2013) Matthew S. Maisak et al.   NATURE

Neuroscience thinks big (and collaboratively)

(2013) Eric R. Kandel et al.   NATURE REVIEWS NEUROSCIENCE

Functional Identification of Spike-Processing Neural Circuits

(2013) Aurel A. Lazar et al.   NEURAL COMPUTATION

NeuroElectro.org: a community database on the electrophysiological diversity of mammalian neuron types

(2013) Tripathy Shreejoy et al.   Frontiers in Neuroinformatics

Stochastic, Adaptive Sampling of Information by Microvilli in Fly Photoreceptors

(2012) Zhuoyi Song et al.   CURRENT BIOLOGY

Optic Glomeruli and Their Inputs in Drosophila Share an Organizational Ground Pattern with the Antennal Lobes

(2012) L. Mu et al.   JOURNAL OF NEUROSCIENCE

The Connection-set Algebra—A Novel Formalism for the Representation of Connectivity Structure in Neuronal Network Models

(2012) Mikael Djurfeldt   NEUROINFORMATICS

Multiple Spectral Inputs Improve Motion Discrimination in the Drosophila Visual System

(2012) T. J. Wardill et al.   SCIENCE

A Large-Scale Model of the Functioning Brain

(2012) C. Eliasmith et al.   SCIENCE

Flexible neuronal network simulation framework using code generation for NVidia® CUDA™

(2011) Thomas Nowotny   BMC NEUROSCIENCE

Understanding the functional consequences of synaptic specialization: insight from the Drosophila antennal lobe

(2011) Rachel I Wilson   CURRENT OPINION IN NEUROBIOLOGY

Studying sensorimotor integration in insects

(2011) Stephen J Huston et al.   CURRENT OPINION IN NEUROBIOLOGY

PyCUDA and PyOpenCL: A scripting-based approach to GPU run-time code generation

(2011) Andreas Klöckner et al.   PARALLEL COMPUTING

An Efficient Simulation Environment for Modeling Large-Scale Cortical Processing

(2011) Micah Richert et al.   Frontiers in Neuroinformatics

Walking Modulates Speed Sensitivity in Drosophila Motion Vision

(2010) M. Eugenia Chiappe et al.   CURRENT BIOLOGY

Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution

(2010) Ann-Shyn Chiang et al.   CURRENT BIOLOGY

Semi-automated reconstruction of neural circuits using electron microscopy

(2010) Dmitri B Chklovskii et al.   CURRENT OPINION IN NEUROBIOLOGY

System identification of Drosophila olfactory sensory neurons

(2010) Anmo J. Kim et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

(2010) Hanchuan Peng et al.   NATURE BIOTECHNOLOGY

iqr: A Tool for the Construction of Multi-level Simulations of Brain and Behaviour

(2010) Ulysses Bernardet et al.   NEUROINFORMATICS

Run-Time Interoperability Between Neuronal Network Simulators Based on the MUSIC Framework

(2010) Mikael Djurfeldt et al.   NEUROINFORMATICS

Design Principles of Insect and Vertebrate Visual Systems

(2010) Joshua R. Sanes et al.   NEURON

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail

(2010) Padraig Gleeson et al.   PLoS Computational Biology

A configurable simulation environment for the efficient simulation of large-scale spiking neural networks on graphics processors

(2009) Jayram Moorkanikara Nageswaran et al.   NEURAL NETWORKS

Towards a virtual fly brain

(2009) J. D. Armstrong et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Python scripting in the Nengo simulator

(2009) Terrence Stewart   Frontiers in Neuroinformatics

PCSIM: A Parallel Simulation Environment for Neural Circuits Fully Integrated with Python

(2009) Dejan Pecevski   Frontiers in Neuroinformatics

The Color-Vision Circuit in the Medulla of Drosophila

(2008) Javier Morante et al.   CURRENT BIOLOGY

A Simple Vision-Based Algorithm for Decision Making in Flying Drosophila

(2008) Gaby Maimon et al.   CURRENT BIOLOGY