Transcriptomic analysis reveals the flooding tolerant mechanism in flooding tolerant line and abscisic acid treated soybean

Quantitative Proteomics Reveals the Flooding-Tolerance Mechanism in Mutant and Abscisic Acid-Treated Soybean

(2016) Xiaojian Yin et al.   JOURNAL OF PROTEOME RESEARCH

Nuclear Proteomics Reveals the Role of Protein Synthesis and Chromatin Structure in Root Tip of Soybean during the Initial Stage of Flooding Stress

(2016) Xiaojian Yin et al.   JOURNAL OF PROTEOME RESEARCH

Gel-free/label-free proteomic analysis of root tip of soybean over time under flooding and drought stresses

(2016) Xin Wang et al.   Journal of Proteomics

Biological Networks Underlying Abiotic Stress Tolerance in Temperate Crops—A Proteomic Perspective

(2015) Klára Kosová et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Quantitative proteomics of nuclear phosphoproteins in the root tip of soybean during the initial stages of flooding stress

(2015) Xiaojian Yin et al.   Journal of Proteomics

Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions

(2015) Jun Matsuzaki et al.   PLANT CELL

Phosphoproteomics Reveals the Effect of Ethylene in Soybean Root under Flooding Stress

(2014) Xiaojian Yin et al.   JOURNAL OF PROTEOME RESEARCH

Analysis of initial changes in the proteins of soybean root tip under flooding stress using gel-free and gel-based proteomic techniques

(2014) Xiaojian Yin et al.   Journal of Proteomics

Root responses to flooding

(2013) Margret Sauter   CURRENT OPINION IN PLANT BIOLOGY

Identification of Indicator Proteins Associated with Flooding Injury in Soybean Seedlings Using Label-free Quantitative Proteomics

(2013) Yohei Nanjo et al.   JOURNAL OF PROTEOME RESEARCH

Label-Free Quantitative Proteomic Analysis of Abscisic Acid Effect in Early-Stage Soybean under Flooding

(2013) Setsuko Komatsu et al.   JOURNAL OF PROTEOME RESEARCH

Proteomic analysis of the flooding tolerance mechanism in mutant soybean

(2013) Setsuko Komatsu et al.   Journal of Proteomics

OsTZF1, a CCCH-Tandem Zinc Finger Protein, Confers Delayed Senescence and Stress Tolerance in Rice by Regulating Stress-Related Genes

(2013) A. Jan et al.   PLANT PHYSIOLOGY

Genome-Wide Expression of Transcriptomes and Their Co-Expression Pattern in Subtropical Maize (Zea mays L.) under Waterlogging Stress

(2013) Nepolean Thirunavukkarasu et al.   PLoS One

Proteins from land plants – Potential resources for human nutrition and food security

(2013) Li Day   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Mapping of Quantitative Trait Loci Associated with Resistance to and Flooding Tolerance in Soybean

(2012) V. T. Nguyen et al.   CROP SCIENCE

Uniconazole, a cytochrome P450 inhibitor, inhibits trans-zeatin biosynthesis in Arabidopsis

(2012) Eriko Sasaki et al.   PHYTOCHEMISTRY

Identification of genes involved in bamboo fiber development

(2011) Vineeta Rai et al.   GENE

Activation of a mitochondrial ATPase gene induces abnormal seed development in Arabidopsis

(2011) Kon Baek et al.   MOLECULES AND CELLS

Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings

(2011) Yohei Nanjo et al.   PLANT MOLECULAR BIOLOGY

Ubiquitin/proteasome-mediated proteolysis is involved in the response to flooding stress in soybean roots, independent of oxygen limitation

(2011) Yuki Yanagawa et al.   PLANT SCIENCE

Comparative proteomics analysis of differentially expressed proteins in soybean cell wall during flooding stress

(2010) Setsuko Komatsu et al.   AMINO ACIDS

Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases

(2010) Satish K Guttikonda et al.   BMC PLANT BIOLOGY

RNA sequencing: advances, challenges and opportunities

(2010) Fatih Ozsolak et al.   NATURE REVIEWS GENETICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

A Comprehensive Analysis of the Soybean Genes and Proteins Expressed under Flooding Stress using Transcriptome and Proteome Techniques

(2009) Setsuko Komatsu et al.   JOURNAL OF PROTEOME RESEARCH

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

MEROPS: the peptidase database

(2009) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Transcript Profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR Arrhythmic Triple Mutant Reveals a Role for the Circadian Clock in Cold Stress Response

(2009) Norihito Nakamichi et al.   PLANT AND CELL PHYSIOLOGY

Role of plant RNA-binding proteins in development, stress response and genome organization

(2009) Zdravko J. Lorković   TRENDS IN PLANT SCIENCE

Analysis of the platypus genome suggests a transposon origin for mammalian imprinting

(2009) Andrew J Pask et al.   GENOME BIOLOGY

Flooding Stress: Acclimations and Genetic Diversity

(2008) J. Bailey-Serres et al.   Annual Review of Plant Biology

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Identification of ubiquitinated proteins in Arabidopsis

(2008) Concepción Manzano et al.   PLANT MOLECULAR BIOLOGY