Genome-Wide Expression of Transcriptomes and Their Co-Expression Pattern in Subtropical Maize (Zea mays L.) under Waterlogging Stress

Exploring Tomato Gene Functions Based on Coexpression Modules Using Graph Clustering and Differential Coexpression Approaches

(2012) A. Fukushima et al.   PLANT PHYSIOLOGY

Making sense of low oxygen sensing

(2012) Julia Bailey-Serres et al.   TRENDS IN PLANT SCIENCE

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

Global Landscape of a Co-Expressed Gene Network in Barley and its Application to Gene Discovery in Triticeae Crops

(2011) Keiichi Mochida et al.   PLANT AND CELL PHYSIOLOGY

The AP2/ERF Transcription Factor AtERF73/HRE1 Modulates Ethylene Responses during Hypoxia in Arabidopsis

(2011) C.-Y. Yang et al.   PLANT PHYSIOLOGY

Gene Coexpression Network Alignment and Conservation of Gene Modules between Two Grass Species: Maize and Rice

(2011) S. P. Ficklin et al.   PLANT PHYSIOLOGY

Insights into Hypoxic Systemic Responses Based on Analyses of Transcriptional Regulation in Arabidopsis

(2011) Fu-Chiun Hsu et al.   PLoS One

Combining Genome-Wide Association Mapping and Transcriptional Networks to Identify Novel Genes Controlling Glucosinolates in Arabidopsis thaliana

(2011) Eva K. F. Chan et al.   PLOS BIOLOGY

Identification of transcriptome induced in roots of maize seedlings at the late stage of waterlogging

(2010) Xiling Zou et al.   BMC PLANT BIOLOGY

Misregulation of the LOB domain gene DDA1 suggests possible functions in auxin signalling and photomorphogenesis

(2010) Amanda Mangeon et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Association of Multiple Interacting Genes with Specific Phenotypes in Rice Using Gene Coexpression Networks

(2010) Stephen P. Ficklin et al.   PLANT PHYSIOLOGY

The Heat-Inducible Transcription Factor HsfA2 Enhances Anoxia Tolerance in Arabidopsis

(2010) V. Banti et al.   PLANT PHYSIOLOGY

Cross-Kingdom Comparison of Transcriptomic Adjustments to Low-Oxygen Stress Highlights Conserved and Plant-Specific Responses

(2010) A. Mustroph et al.   PLANT PHYSIOLOGY

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

Genetic dissection of the role of ethylene in regulating auxin-dependent lateral and adventitious root formation in tomato

(2009) Sangeeta Negi et al.   PLANT JOURNAL

Transcription factors and regulation of photosynthetic and related metabolism under environmental stresses

(2008) Nelson J. M. Saibo et al.   ANNALS OF BOTANY

Addressing drought tolerance in maize by transcriptional profiling and mapping

(2008) Rosanna Marino et al.   MOLECULAR GENETICS AND GENOMICS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics

(2008) K. Baerenfaller et al.   SCIENCE

The expression pattern of a rice proteinase inhibitor gene OsPI8-1 implies its role in plant development

(2007) Jiang Wang et al.   JOURNAL OF PLANT PHYSIOLOGY