Hd3a,RFT1andEhd1integrate photoperiodic and drought stress signals to delay the floral transition in rice

A Drought-Inducible Transcription Factor Delays Reproductive Timing in Rice

(2016) Chunyu Zhang et al.   PLANT PHYSIOLOGY

Loss of floral repressor function adapts rice to higher latitudes in Europe

(2015) Jorge Gómez-Ariza et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic interactions between diverged alleles ofEarly heading date 1(Ehd1) andHeading date 3a(Hd3a)/ RICE FLOWERING LOCUS T1(RFT1) control differential heading and contribute to regional adaptation in rice (Oryza sativa)

(2015) Jing Zhao et al.   NEW PHYTOLOGIST

The evolution of drought escape and avoidance in natural herbaceous populations

(2015) Nicholas J. Kooyers   PLANT SCIENCE

Recent advances in the dissection of drought-stress regulatory networks and strategies for development of drought-tolerant transgenic rice plants

(2015) Daisuke Todaka et al.   Frontiers in Plant Science

Molecular control of seasonal flowering in rice, arabidopsis and temperate cereals

(2014) Roshi Shrestha et al.   ANNALS OF BOTANY

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

The genetics of divergence and reproductive isolation between ecotypes ofPanicum hallii

(2014) David B. Lowry et al.   NEW PHYTOLOGIST

Replicate altitudinal clines reveal that evolutionary flexibility underlies adaptation to drought stress in annualMimulus guttatus

(2014) Nicholas J. Kooyers et al.   NEW PHYTOLOGIST

Grain Number, Plant Height, and Heading Date7 Is a Central Regulator of Growth, Development, and Stress Response

(2014) X. Weng et al.   PLANT PHYSIOLOGY

Integrated Analysis of the Effects of Cold and Dehydration on Rice Metabolites, Phytohormones, and Gene Transcripts

(2014) K. Maruyama et al.   PLANT PHYSIOLOGY

Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice

(2014) He Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of chromatin in water stress responses in plants

(2013) Soon-Ki Han et al.   JOURNAL OF EXPERIMENTAL BOTANY

Molecular Control of Flowering in Response to Day Length in Rice

(2013) Vittoria Brambilla et al.   Journal of Integrative Plant Biology

Mass flowering of the tropical treeShorea beccarianawas preceded by expression changes in flowering and drought-responsive genes

(2013) Masaki J. Kobayashi et al.   MOLECULAR ECOLOGY

Large-scale gene function analysis with the PANTHER classification system

(2013) Huaiyu Mi et al.   Nature Protocols

Adaptive differentiation of traits related to resource use in a desert annual along a resource gradient

(2013) Larry C. Brouillette et al.   NEW PHYTOLOGIST

GIGANTEA Enables Drought Escape Response via Abscisic Acid-Dependent Activation of the Florigens and SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1

(2013) M. Riboni et al.   PLANT PHYSIOLOGY

Arabidopsis Enhanced Drought Tolerance1/HOMEODOMAIN GLABROUS11 Confers Drought Tolerance in Transgenic Rice without Yield Penalty

(2013) L. Yu et al.   PLANT PHYSIOLOGY

Analysis of transcript and metabolite levels in Italian rice (Oryza sativa L.) cultivars subjected to osmotic stress or benzothiadiazole treatment

(2013) Elena Baldoni et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The Suppression of WRKY44 by GIGANTEA-miR172 Pathway Is Involved in Drought Response of Arabidopsis thaliana

(2013) Yingying Han et al.   PLoS One

Ehd4 Encodes a Novel and Oryza-Genus-Specific Regulator of Photoperiodic Flowering in Rice

(2013) He Gao et al.   PLoS Genetics

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The genetic basis of flowering responses to seasonal cues

(2012) Fernando Andrés et al.   NATURE REVIEWS GENETICS

Natural Variation in Hd17, a Homolog of Arabidopsis ELF3 That is Involved in Rice Photoperiodic Flowering

(2012) Kazuki Matsubara et al.   PLANT AND CELL PHYSIOLOGY

Tests for the joint evolution of mating system and drought escape in Mimulus

(2011) Christopher T. Ivey et al.   ANNALS OF BOTANY

Identification of Cis-Acting Promoter Elements in Cold- and Dehydration-Induced Transcriptional Pathways in Arabidopsis, Rice, and Soybean

(2011) K. Maruyama et al.   DNA RESEARCH

Plasticity and evolution in drought avoidance and escape in the annual plant Brassica rapa

(2011) Steven J. Franks   NEW PHYTOLOGIST

Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering

(2011) Kazuki Matsubara et al.   PLANT JOURNAL

Agro-morphological characterization of a population of introgression lines derived from crosses between IR 64 (Oryza sativa indica) and TOG 5681 (Oryza glaberrima) for drought tolerance

(2011) R. Bocco et al.   PLANT SCIENCE

GIGANTEA directly activates Flowering Locus T in Arabidopsis thaliana

(2011) M. Sawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Modulation of transcription factor and metabolic pathway genes in response to water-deficit stress in rice

(2010) Swatismita Ray et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A Major QTL, Ghd8, Plays Pleiotropic Roles in Regulating Grain Productivity, Plant Height, and Heading Date in Rice

(2010) Wen-Hao Yan et al.   Molecular Plant

A pair of floral regulators sets critical day length for Hd3a florigen expression in rice

(2010) Hironori Itoh et al.   NATURE GENETICS

Drought advances spring growth phenology of the Mediterranean shrub Erica multiflora

(2010) M. Bernal et al.   PLANT BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Arabidopsis DOF Transcription Factors Act Redundantly to Reduce CONSTANS Expression and Are Essential for a Photoperiodic Flowering Response

(2009) Fabio Fornara et al.   DEVELOPMENTAL CELL

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Transcript Profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR Arrhythmic Triple Mutant Reveals a Role for the Circadian Clock in Cold Stress Response

(2009) Norihito Nakamichi et al.   PLANT AND CELL PHYSIOLOGY

Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses

(2009) K. Nakashima et al.   PLANT PHYSIOLOGY

Hd3a and RFT1 are essential for flowering in rice

(2008) R. Komiya et al.   DEVELOPMENT

Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice

(2008) Weiya Xue et al.   NATURE GENETICS

Ehd2, a Rice Ortholog of the Maize INDETERMINATE1 Gene, Promotes Flowering by Up-Regulating Ehd1

(2008) K. Matsubara et al.   PLANT PHYSIOLOGY