BetaSCPWeb: side-chain prediction for protein structures using Voronoi diagrams and geometry prioritization

Protein structure optimization by side-chain positioning via beta-complex

(2012) Joonghyun Ryu et al.   JOURNAL OF GLOBAL OPTIMIZATION

Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation

(2011) Yang Cao et al.   BIOINFORMATICS

RASP: rapid modeling of protein side chain conformations

(2011) Zhichao Miao et al.   BIOINFORMATICS

A Smoothed Backbone-Dependent Rotamer Library for Proteins Derived from Adaptive Kernel Density Estimates and Regressions

(2011) Maxim V. Shapovalov et al.   STRUCTURE

Quasi-worlds and quasi-operators on quasi-triangulations

(2010) Deok-Soo Kim et al.   COMPUTER-AIDED DESIGN

Three-dimensional beta-shapes and beta-complexes via quasi-triangulation

(2010) Deok-Soo Kim et al.   COMPUTER-AIDED DESIGN

Improved prediction of protein side-chain conformations with SCWRL4

(2009) Georgii G. Krivov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS