Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner

Intramolecular circularization increases efficiency of RNA sequencing and enables CLIP-Seq of nuclear RNA from human cells

(2015) Y. Chu et al.   NUCLEIC ACIDS RESEARCH

HIV-1 RNAs are Not Part of the Argonaute 2 Associated RNA Interference Pathway in Macrophages

(2015) Valentina Vongrad et al.   PLoS One

Reduced Expression of Argonaute 1, Argonaute 2 and TRBP Changes Levels and Intracellular Distribution of RNAi Factors

(2015) Masayuki Matsui et al.   Scientific Reports

Ago2 facilitates Rad51 recruitment and DNA double-strand break repair by homologous recombination

(2014) Min Gao et al.   CELL RESEARCH

Replication of Many Human Viruses Is Refractory to Inhibition by Endogenous Cellular MicroRNAs

(2014) Hal P. Bogerd et al.   JOURNAL OF VIROLOGY

Improved vectors and genome-wide libraries for CRISPR screening

(2014) Neville E Sanjana et al.   NATURE METHODS

Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells

(2014) M. Allo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression

(2013) J. M. Taliaferro et al.   GENES & DEVELOPMENT

Hyb: A bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data

(2013) Anthony J. Travis et al.   METHODS

Argonaute proteins: functional insights and emerging roles

(2013) Gunter Meister   NATURE REVIEWS GENETICS

In-Depth Analysis of the Interaction of HIV-1 with Cellular microRNA Biogenesis and Effector Mechanisms

(2013) A. W. Whisnant et al.   mBio

Next-Generation Sequencing of Small RNAs from HIV-Infected Cells Identifies Phased microRNA Expression Patterns and Candidate Novel microRNAs Differentially Expressed upon Infection

(2013) S. T. Chang et al.   mBio

Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells

(2013) Vera Huang et al.   PLoS Genetics

Site identification in high-throughput RNA–protein interaction data

(2012) Philip J. Uren et al.   BIOINFORMATICS

A Role for Small RNAs in DNA Double-Strand Break Repair

(2012) Wei Wei et al.   CELL

MicroRNAs and HIV-1: Complex Interactions

(2012) Zachary Klase et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

HIV-1 Gag co-opts a cellular complex containing DDX6, a helicase that facilitates capsid assembly

(2012) Jonathan C. Reed et al.   JOURNAL OF CELL BIOLOGY

HIV-1 Replication and APOBEC3 Antiviral Activity Are Not Regulated by P Bodies

(2012) P. K. Phalora et al.   JOURNAL OF VIROLOGY

Dicer-dependent and -independent Argonaute2 Protein Interaction Networks in Mammalian Cells

(2012) Anne Frohn et al.   MOLECULAR & CELLULAR PROTEOMICS

Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells

(2012) Moussa Benhamed et al.   NATURE CELL BIOLOGY

Argonaute proteins couple chromatin silencing to alternative splicing

(2012) Maya Ameyar-Zazoua et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing

(2012) Karen E. Ocwieja et al.   NUCLEIC ACIDS RESEARCH

High-Throughput Functional MicroRNAs Profiling by Recombinant AAV-Based MicroRNA Sensor Arrays

(2012) Wenhong Tian et al.   PLoS One

Tiling genomes of pathogenic viruses identifies potent antiviral shRNAs and reveals a role for secondary structure in shRNA efficacy

(2012) X. Tan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells

(2012) Claudia F Althaus et al.   Retrovirology

Association of Argonaute proteins and microRNAs can occur after cell lysis

(2012) K. J. Riley et al.   RNA

Heritable gene targeting in zebrafish using customized TALENs

(2011) Peng Huang et al.   NATURE BIOTECHNOLOGY

Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs

(2011) Anthony K L Leung et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Retroviral GAG proteins recruit AGO2 on viral RNAs without affecting RNA accumulation and translation

(2011) Manuella Bouttier et al.   NUCLEIC ACIDS RESEARCH

Deep sequencing of virus-infected cells reveals HIV-encoded small RNAs

(2011) N. C. T. Schopman et al.   NUCLEIC ACIDS RESEARCH

Posttranscriptional activation of gene expression in Xenopus laevis oocytes by microRNA-protein complexes (microRNPs)

(2011) R. D. Mortensen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alternative splicing: regulation of HIV-1 multiplication as a target for therapeutic action

(2010) Jamal Tazi et al.   FEBS Journal

Excessive RNA Splicing and Inhibition of HIV-1 Replication Induced by Modified U1 Small Nuclear RNAs

(2010) D. Mandal et al.   JOURNAL OF VIROLOGY

Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter

(2010) Yongjun Chu et al.   NUCLEIC ACIDS RESEARCH

CLIPZ: a database and analysis environment for experimentally determined binding sites of RNA-binding proteins

(2010) M. Khorshid et al.   NUCLEIC ACIDS RESEARCH

Problems associated with reporter assays in RNAi studies

(2010) Guihua Sun et al.   RNA Biology

A Genome-wide Short Hairpin RNA Screening of Jurkat T-cells for Human Proteins Contributing to Productive HIV-1 Replication

(2009) Man Lung Yeung et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cellular MicroRNA and P Bodies Modulate Host-HIV-1 Interactions

(2009) Robin Nathans et al.   MOLECULAR CELL

Architecture and secondary structure of an entire HIV-1 RNA genome

(2009) Joseph M. Watts et al.   NATURE

Control of alternative splicing through siRNA-mediated transcriptional gene silencing

(2009) Mariano Alló et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Suppression of HIV-1 replication by microRNA effectors

(2009) Christine Chable-Bessia et al.   Retrovirology

Role of Cellular RNA Processing Factors in Human Immunodeficiency Virus Type 1 mRNA Metabolism, Replication, and Infectivity

(2008) J. A. Jablonski et al.   JOURNAL OF VIROLOGY

MicroRNA-373 induces expression of genes with complementary promoter sequences

(2008) R. F. Place et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MicroRNA profile changes in human immunodeficiency virus type 1 (HIV-1) seropositive individuals

(2008) Laurent Houzet et al.   Retrovirology

Human cellular microRNA hsa-miR-29a interferes with viral nef protein expression and HIV-1 replication

(2008) Jasmine K Ahluwalia et al.   Retrovirology

Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs

(2008) M. Landthaler et al.   RNA